EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027294 (Gene tree)
Gene ID: -
Gene Symbol: Aco1
Alias: Aco-1|Ireb1|Irebp|Irp1
Full Name: aconitase 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 61195 bases
Position: chr4:37712961-37774155
Accession: 87879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0065032	Aconitase	PF00330.20	3.7e-182	1	1
MGP_CASTEiJ_P0065032	Aconitase_C	PF00694.19	2.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0065033	-	709	-	-	- (aa)	-	-
MGP_CASTEiJ_T0065032	-	3830	-	MGP_CASTEiJ_P0065032	889 (aa)	-	P28271
MGP_CASTEiJ_T0065035	-	1008	-	MGP_CASTEiJ_P0065035	301 (aa)	-	-
MGP_CASTEiJ_T0065034	-	410	-	-	- (aa)	-	-
MGP_CASTEiJ_T0065036	-	638	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027294	Aco1	99	64.516	MGP_CASTEiJ_G0033836	Ireb2	91	62.317