EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0027295 (Gene tree)
Gene ID
-
Gene Symbol
Ddx58
Alias
6430573D20Rik|C330021E21|RIG-I|RLR-1
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
43728 bases
Position
chr4:37774118-37817845
Accession
2442858
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0065042ResIIIPF04851.158.8e-1811
MGP_CASTEiJ_P0065040ResIIIPF04851.151.5e-1711
MGP_CASTEiJ_P0065040RIG-I_C-RDPF11648.85e-3511
MGP_CASTEiJ_P0065042DEADPF00270.298.3e-1711
MGP_CASTEiJ_P0065040DEADPF00270.291.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0065044-1250--- (aa)--
MGP_CASTEiJ_T0065045-541--- (aa)--
MGP_CASTEiJ_T0065046-1607--- (aa)--
MGP_CASTEiJ_T0065040-3877-MGP_CASTEiJ_P0065040926 (aa)--
MGP_CASTEiJ_T0065041-756--- (aa)--
MGP_CASTEiJ_T0065042-2127-MGP_CASTEiJ_P0065042707 (aa)--
MGP_CASTEiJ_T0065043-1641--- (aa)--
MGP_CASTEiJ_T0065037-2941-MGP_CASTEiJ_P0065037962 (aa)-Q6Q899
MGP_CASTEiJ_T0065039-3536--- (aa)--
MGP_CASTEiJ_T0065038-383--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0027295's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027295's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0027295Ddx589830.691MGP_CASTEiJ_G0024968Ifih19730.691
MGP_CASTEiJ_G0027295Ddx587235.203MGP_CASTEiJ_G0018469Dhx589732.756

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