EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027475 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp3
Alias: 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1
Full Name: polypyrimidine tract binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 81755 bases
Position: chr4:57955775-58037529
Accession: 1923334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0065876	RRM_5	PF13893.6	1.2e-61	1	3
MGP_CASTEiJ_P0065876	RRM_5	PF13893.6	1.2e-61	2	3
MGP_CASTEiJ_P0065876	RRM_5	PF13893.6	1.2e-61	3	3
MGP_CASTEiJ_P0065875	RRM_5	PF13893.6	1.2e-61	1	3
MGP_CASTEiJ_P0065875	RRM_5	PF13893.6	1.2e-61	2	3
MGP_CASTEiJ_P0065875	RRM_5	PF13893.6	1.2e-61	3	3
MGP_CASTEiJ_P0065878	RRM_5	PF13893.6	1.4e-47	1	1
MGP_CASTEiJ_P0065881	RRM_5	PF13893.6	7.3e-06	1	1
MGP_CASTEiJ_P0065876	RRM_1	PF00076.22	2.1e-31	1	3
MGP_CASTEiJ_P0065876	RRM_1	PF00076.22	2.1e-31	2	3
MGP_CASTEiJ_P0065876	RRM_1	PF00076.22	2.1e-31	3	3
MGP_CASTEiJ_P0065875	RRM_1	PF00076.22	2.3e-31	1	3
MGP_CASTEiJ_P0065875	RRM_1	PF00076.22	2.3e-31	2	3
MGP_CASTEiJ_P0065875	RRM_1	PF00076.22	2.3e-31	3	3
MGP_CASTEiJ_P0065881	RRM_1	PF00076.22	2.8e-11	1	1
MGP_CASTEiJ_P0065878	RRM_1	PF00076.22	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0065875	-	6673	XM_006537851	MGP_CASTEiJ_P0065875	554 (aa)	XP_006537914	Q8BHD7
MGP_CASTEiJ_T0065877	-	669	-	-	- (aa)	-	-
MGP_CASTEiJ_T0065876	-	3410	-	MGP_CASTEiJ_P0065876	551 (aa)	-	-
MGP_CASTEiJ_T0065880	-	558	-	MGP_CASTEiJ_P0065880	41 (aa)	-	-
MGP_CASTEiJ_T0065881	-	550	-	MGP_CASTEiJ_P0065881	146 (aa)	-	-
MGP_CASTEiJ_T0065882	-	447	-	-	- (aa)	-	-
MGP_CASTEiJ_T0065883	-	606	-	MGP_CASTEiJ_P0065883	104 (aa)	-	-
MGP_CASTEiJ_T0065879	-	1286	-	MGP_CASTEiJ_P0065879	45 (aa)	-	-
MGP_CASTEiJ_T0065878	-	566	-	MGP_CASTEiJ_P0065878	188 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027475	Ptbp3	90	78.788	MGP_CASTEiJ_G0026983	Ptbp2	100	67.384
MGP_CASTEiJ_G0027475	Ptbp3	83	35.537	MGP_CASTEiJ_G0031001	Hnrnpl	55	36.207