EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027579 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 155598 bases
Position: chr4:88832190-88987787
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0066309	RRM_5	PF13893.6	1.3e-12	1	2
MGP_CASTEiJ_P0066309	RRM_5	PF13893.6	1.3e-12	2	2
MGP_CASTEiJ_P0066310	RRM_5	PF13893.6	1.5e-12	1	2
MGP_CASTEiJ_P0066310	RRM_5	PF13893.6	1.5e-12	2	2
MGP_CASTEiJ_P0066307	RRM_5	PF13893.6	1.8e-12	1	2
MGP_CASTEiJ_P0066307	RRM_5	PF13893.6	1.8e-12	2	2
MGP_CASTEiJ_P0066308	RRM_5	PF13893.6	2e-12	1	2
MGP_CASTEiJ_P0066308	RRM_5	PF13893.6	2e-12	2	2
MGP_CASTEiJ_P0066312	RRM_5	PF13893.6	2.2e-12	1	2
MGP_CASTEiJ_P0066312	RRM_5	PF13893.6	2.2e-12	2	2
MGP_CASTEiJ_P0066313	RRM_5	PF13893.6	2.2e-12	1	2
MGP_CASTEiJ_P0066313	RRM_5	PF13893.6	2.2e-12	2	2
MGP_CASTEiJ_P0066309	RRM_1	PF00076.22	1.2e-66	1	3
MGP_CASTEiJ_P0066309	RRM_1	PF00076.22	1.2e-66	2	3
MGP_CASTEiJ_P0066309	RRM_1	PF00076.22	1.2e-66	3	3
MGP_CASTEiJ_P0066310	RRM_1	PF00076.22	1.4e-66	1	3
MGP_CASTEiJ_P0066310	RRM_1	PF00076.22	1.4e-66	2	3
MGP_CASTEiJ_P0066310	RRM_1	PF00076.22	1.4e-66	3	3
MGP_CASTEiJ_P0066307	RRM_1	PF00076.22	1.6e-66	1	3
MGP_CASTEiJ_P0066307	RRM_1	PF00076.22	1.6e-66	2	3
MGP_CASTEiJ_P0066307	RRM_1	PF00076.22	1.6e-66	3	3
MGP_CASTEiJ_P0066308	RRM_1	PF00076.22	1.7e-66	1	3
MGP_CASTEiJ_P0066308	RRM_1	PF00076.22	1.7e-66	2	3
MGP_CASTEiJ_P0066308	RRM_1	PF00076.22	1.7e-66	3	3
MGP_CASTEiJ_P0066313	RRM_1	PF00076.22	2e-66	1	3
MGP_CASTEiJ_P0066313	RRM_1	PF00076.22	2e-66	2	3
MGP_CASTEiJ_P0066313	RRM_1	PF00076.22	2e-66	3	3
MGP_CASTEiJ_P0066312	RRM_1	PF00076.22	2.1e-66	1	3
MGP_CASTEiJ_P0066312	RRM_1	PF00076.22	2.1e-66	2	3
MGP_CASTEiJ_P0066312	RRM_1	PF00076.22	2.1e-66	3	3
MGP_CASTEiJ_P0066315	RRM_1	PF00076.22	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0066316	-	408	-	MGP_CASTEiJ_P0066316	83 (aa)	-	-
MGP_CASTEiJ_T0066319	-	415	-	-	- (aa)	-	-
MGP_CASTEiJ_T0066307	-	3839	XM_006502778	MGP_CASTEiJ_P0066307	373 (aa)	XP_006502841	Q60899
MGP_CASTEiJ_T0066315	-	425	-	MGP_CASTEiJ_P0066315	125 (aa)	-	-
MGP_CASTEiJ_T0066314	-	3195	-	-	- (aa)	-	-
MGP_CASTEiJ_T0066308	-	3796	-	MGP_CASTEiJ_P0066308	376 (aa)	-	-
MGP_CASTEiJ_T0066309	-	3670	-	MGP_CASTEiJ_P0066309	347 (aa)	-	-
MGP_CASTEiJ_T0066311	-	930	-	-	- (aa)	-	-
MGP_CASTEiJ_T0066310	-	3729	-	MGP_CASTEiJ_P0066310	360 (aa)	-	-
MGP_CASTEiJ_T0066313	-	1167	-	MGP_CASTEiJ_P0066313	388 (aa)	-	-
MGP_CASTEiJ_T0066312	-	1282	-	MGP_CASTEiJ_P0066312	389 (aa)	-	-
MGP_CASTEiJ_T0066317	-	511	-	MGP_CASTEiJ_P0066317	23 (aa)	-	-
MGP_CASTEiJ_T0066318	-	450	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027579	Elavl2	88	39.506	MGP_CASTEiJ_G0023416	Celf4	91	37.037
MGP_CASTEiJ_G0027579	Elavl2	90	37.349	MGP_CASTEiJ_G0022384	Pabpc6	60	37.349
MGP_CASTEiJ_G0027579	Elavl2	88	34.783	MGP_CASTEiJ_G0025058	Rbm45	88	32.886
MGP_CASTEiJ_G0027579	Elavl2	78	40.741	MGP_CASTEiJ_G0033906	Celf6	89	37.037
MGP_CASTEiJ_G0027579	Elavl2	97	30.857	MGP_CASTEiJ_G0016890	Celf5	97	30.857
MGP_CASTEiJ_G0027579	Elavl2	59	33.784	MGP_CASTEiJ_G0026783	Rbm8a	58	32.353
MGP_CASTEiJ_G0027579	Elavl2	89	34.940	MGP_CASTEiJ_G0027867	Pabpc4	96	32.576
MGP_CASTEiJ_G0027579	Elavl2	60	41.558	MGP_CASTEiJ_G0024960	Rbms1	61	40.645
MGP_CASTEiJ_G0027579	Elavl2	96	34.615	MGP_CASTEiJ_G0030063	Tia1	89	34.615
MGP_CASTEiJ_G0027579	Elavl2	100	79.292	MGP_CASTEiJ_G0033478	Elavl3	100	78.400
MGP_CASTEiJ_G0027579	Elavl2	89	37.349	MGP_CASTEiJ_G0021054	Pabpc1	55	37.349
MGP_CASTEiJ_G0027579	Elavl2	89	37.037	MGP_CASTEiJ_G0035010	Pabpc5	94	37.037
MGP_CASTEiJ_G0027579	Elavl2	93	34.615	MGP_CASTEiJ_G0032110	Tial1	72	34.615
MGP_CASTEiJ_G0027579	Elavl2	92	34.940	MGP_CASTEiJ_G0026012	Pabpc1l	64	34.940
MGP_CASTEiJ_G0027579	Elavl2	89	36.145	MGP_CASTEiJ_G0023577	Pabpc2	59	36.145
MGP_CASTEiJ_G0027579	Elavl2	67	35.714	MGP_CASTEiJ_G0029200	Snrnp35	60	37.500
MGP_CASTEiJ_G0027579	Elavl2	66	30.952	MGP_CASTEiJ_G0027997	Trnau1ap	98	30.952
MGP_CASTEiJ_G0027579	Elavl2	64	37.500	MGP_CASTEiJ_G0016816	Cirbp	76	37.500
MGP_CASTEiJ_G0027579	Elavl2	76	41.975	MGP_CASTEiJ_G0026707	Celf3	63	41.975
MGP_CASTEiJ_G0027579	Elavl2	63	32.911	MGP_CASTEiJ_G0034524	Rbm3	82	38.710
MGP_CASTEiJ_G0027579	Elavl2	85	41.975	MGP_CASTEiJ_G0025323	Celf1	69	41.975
MGP_CASTEiJ_G0027579	Elavl2	100	89.751	MGP_CASTEiJ_G0027708	Elavl4	99	89.315
MGP_CASTEiJ_G0027579	Elavl2	83	39.506	MGP_CASTEiJ_G0024528	Celf2	87	33.333
MGP_CASTEiJ_G0027579	Elavl2	73	34.831	MGP_CASTEiJ_G0034713	Rbmx	86	34.831
MGP_CASTEiJ_G0027579	Elavl2	72	32.632	MGP_CASTEiJ_G0018234	Msi2	70	31.250
MGP_CASTEiJ_G0027579	Elavl2	69	37.209	MGP_CASTEiJ_G0034390	Rbms3	83	37.222
MGP_CASTEiJ_G0027579	Elavl2	89	34.940	MGP_CASTEiJ_G0026358	Pabpc4l	96	34.940