EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027700 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 37540 bases
Position: chr4:107266441-107303980
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0066941	Calreticulin	PF00262.18	3.2e-78	1	2
MGP_CASTEiJ_P0066941	Calreticulin	PF00262.18	3.2e-78	2	2
MGP_CASTEiJ_P0066942	Calreticulin	PF00262.18	1.2e-74	1	2
MGP_CASTEiJ_P0066942	Calreticulin	PF00262.18	1.2e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0066940	-	1042	XM_006502653	MGP_CASTEiJ_P0066940	288 (aa)	XP_006502718	A2A8Z3
MGP_CASTEiJ_T0066941	-	1320	-	MGP_CASTEiJ_P0066941	439 (aa)	-	-
MGP_CASTEiJ_T0066942	-	1603	-	MGP_CASTEiJ_P0066942	419 (aa)	-	-
MGP_CASTEiJ_T0066943	-	532	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027700	Calr4	84	35.769	MGP_CASTEiJ_G0017560	Canx	68	36.790
MGP_CASTEiJ_G0027700	Calr4	77	35.250	MGP_CASTEiJ_G0032847	Clgn	65	34.750
MGP_CASTEiJ_G0027700	Calr4	86	46.543	MGP_CASTEiJ_G0032795	Calr3	86	47.550
MGP_CASTEiJ_G0027700	Calr4	87	62.295	MGP_CASTEiJ_G0032889	Calr	89	62.234