EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027909 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 104002 bases
Position: chr4:124521620-124625621
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0067867	Piwi	PF02171.17	5.1e-57	1	1
MGP_CASTEiJ_P0067870	Piwi	PF02171.17	7.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0067868	-	3058	-	MGP_CASTEiJ_P0067868	877 (aa)	-	-
MGP_CASTEiJ_T0067869	-	2978	-	MGP_CASTEiJ_P0067869	860 (aa)	-	-
MGP_CASTEiJ_T0067867	-	682	-	MGP_CASTEiJ_P0067867	161 (aa)	-	-
MGP_CASTEiJ_T0067873	-	613	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067872	-	690	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067871	-	625	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067870	-	433	-	MGP_CASTEiJ_P0067870	144 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027909	-	99	85.041	MGP_CASTEiJ_G0027910	Ago1	100	89.150
MGP_CASTEiJ_G0027909	-	100	80.505	MGP_CASTEiJ_G0027911	Ago4	100	80.505
MGP_CASTEiJ_G0027909	-	91	90.476	MGP_CASTEiJ_G0021177	Ago2	99	79.422
MGP_CASTEiJ_G0027909	-	83	38.519	MGP_CASTEiJ_G0033362	Piwil4	80	39.161