EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0027919 (Gene tree)
Gene ID: -
Gene Symbol: Sfpq
Alias: 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|Psf|REP1
Full Name: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 17669 bases
Position: chr4:125255821-125273489
Accession: 1918764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0067919	RRM_1	PF00076.22	6.1e-30	1	2
MGP_CASTEiJ_P0067919	RRM_1	PF00076.22	6.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0067920	-	755	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067924	-	644	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067921	-	926	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067919	-	3463	-	MGP_CASTEiJ_P0067919	699 (aa)	-	Q8VIJ6
MGP_CASTEiJ_T0067923	-	967	-	-	- (aa)	-	-
MGP_CASTEiJ_T0067922	-	600	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027919	Sfpq	55	65.891	MGP_CASTEiJ_G0020659	Pspc1	84	71.429