EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0027982 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 123317 bases
Position: chr4:129028985-129152301
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	1	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	2	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	3	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	4	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	5	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	6	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	7	8
MGP_CASTEiJ_P0068246	PUF	PF00806.19	3.3e-70	8	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	1	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	2	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	3	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	4	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	5	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	6	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	7	8
MGP_CASTEiJ_P0068249	PUF	PF00806.19	2.5e-69	8	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	1	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	2	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	3	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	4	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	5	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	6	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	7	8
MGP_CASTEiJ_P0068245	PUF	PF00806.19	2.8e-69	8	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	1	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	2	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	3	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	4	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	5	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	6	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	7	8
MGP_CASTEiJ_P0068250	PUF	PF00806.19	6e-69	8	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	1	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	2	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	3	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	4	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	5	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	6	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	7	8
MGP_CASTEiJ_P0068244	PUF	PF00806.19	6.1e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0068249	-	4017	-	MGP_CASTEiJ_P0068249	1186 (aa)	-	-
MGP_CASTEiJ_T0068248	-	693	-	MGP_CASTEiJ_P0068248	218 (aa)	-	-
MGP_CASTEiJ_T0068245	-	5058	-	MGP_CASTEiJ_P0068245	1092 (aa)	-	-
MGP_CASTEiJ_T0068244	-	5389	XM_006539291	MGP_CASTEiJ_P0068244	1189 (aa)	XP_006539354	Q80U78
MGP_CASTEiJ_T0068247	-	1274	-	-	- (aa)	-	-
MGP_CASTEiJ_T0068246	-	4614	-	MGP_CASTEiJ_P0068246	944 (aa)	-	-
MGP_CASTEiJ_T0068250	-	3991	-	MGP_CASTEiJ_P0068250	1188 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0027982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0027982	Pum1	86	87.294	MGP_CASTEiJ_G0018890	Pum2	100	88.835