EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0027997 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
19178 bases
Position
chr4:130819061-130838238
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0068329RRM_1PF00076.221e-2612
MGP_CASTEiJ_P0068329RRM_1PF00076.221e-2622
MGP_CASTEiJ_P0068328RRM_1PF00076.223.4e-1711
MGP_CASTEiJ_P0068333RRM_1PF00076.221.7e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0068335-553--- (aa)--
MGP_CASTEiJ_T0068334-600-MGP_CASTEiJ_P006833447 (aa)--
MGP_CASTEiJ_T0068337-679--- (aa)--
MGP_CASTEiJ_T0068336-663-MGP_CASTEiJ_P006833649 (aa)--
MGP_CASTEiJ_T0068331-650--- (aa)--
MGP_CASTEiJ_T0068330-1791--- (aa)--
MGP_CASTEiJ_T0068333-474-MGP_CASTEiJ_P0068333146 (aa)--
MGP_CASTEiJ_T0068332-1017-MGP_CASTEiJ_P006833286 (aa)--
MGP_CASTEiJ_T0068339-621--- (aa)--
MGP_CASTEiJ_T0068338-371-MGP_CASTEiJ_P006833870 (aa)--
MGP_CASTEiJ_T0068328-961XM_011250332MGP_CASTEiJ_P0068328247 (aa)XP_011248634Q80VC6
MGP_CASTEiJ_T0068329-1130-MGP_CASTEiJ_P0068329287 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0027997's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0027997's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0027997Trnau1ap9830.952MGP_CASTEiJ_G0027579Elavl26630.952
MGP_CASTEiJ_G0027997Trnau1ap6032.386MGP_CASTEiJ_G0032110Tial17333.019
MGP_CASTEiJ_G0027997Trnau1ap7930.198MGP_CASTEiJ_G0030063Tia16031.285
MGP_CASTEiJ_G0027997Trnau1ap8834.211MGP_CASTEiJ_G0026358Pabpc4l8931.875

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