EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0028037 (Gene tree)
Gene ID
-
Gene Symbol
Lin28a
Alias
AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Lin28a|Tex17|lin-28A
Full Name
lin-28 homolog A (C. elegans)
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
19825 bases
Position
chr4:132679059-132698883
Accession
1890546
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0068528CSDPF00313.223e-1611
MGP_CASTEiJ_P0068531CSDPF00313.222.7e-1211
MGP_CASTEiJ_P0068530CSDPF00313.227.6e-0511
MGP_CASTEiJ_P0068529CSDPF00313.228e-0511
MGP_CASTEiJ_P0068528zf-CCHCPF00098.237.1e-0811
MGP_CASTEiJ_P0068529zf-CCHCPF00098.231.9e-0511
MGP_CASTEiJ_P0068530zf-CCHCPF00098.232.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0068528-3502XM_011250361MGP_CASTEiJ_P0068528209 (aa)XP_011248663Q8K3Y3
MGP_CASTEiJ_T0068529-395-MGP_CASTEiJ_P006852983 (aa)--
MGP_CASTEiJ_T0068531-477-MGP_CASTEiJ_P006853175 (aa)--
MGP_CASTEiJ_T0068530-484-MGP_CASTEiJ_P006853081 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0028037's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028037's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0028037Lin28a10082.667MGP_CASTEiJ_G0016544Lin28b6669.444

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