EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0028079 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
19546 bases
Position
chr4:134701779-134721324
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0068725RRM_1PF00076.225e-2011
MGP_CASTEiJ_P0068727RRM_1PF00076.221.1e-1911
MGP_CASTEiJ_P0068726RRM_1PF00076.221.1e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0068726-3247-MGP_CASTEiJ_P0068726159 (aa)--
MGP_CASTEiJ_T0068727-1966-MGP_CASTEiJ_P0068727158 (aa)--
MGP_CASTEiJ_T0068733-376-MGP_CASTEiJ_P006873372 (aa)--
MGP_CASTEiJ_T0068725-2547-MGP_CASTEiJ_P0068725110 (aa)--
MGP_CASTEiJ_T0068730-717--- (aa)--
MGP_CASTEiJ_T0068728-2234--- (aa)--
MGP_CASTEiJ_T0068729-675--- (aa)--
MGP_CASTEiJ_T0068732-324--- (aa)--
MGP_CASTEiJ_T0068731-756-MGP_CASTEiJ_P006873169 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0028079's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028079's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0028079-7633.721MGP_CASTEiJ_G0018877Sf3b66633.721
MGP_CASTEiJ_G0028079-6834.667MGP_CASTEiJ_G0034524Rbm37933.803
MGP_CASTEiJ_G0028079-8131.461MGP_CASTEiJ_G0026358Pabpc4l5231.461
MGP_CASTEiJ_G0028079-7537.805MGP_CASTEiJ_G0016816Cirbp7337.975
MGP_CASTEiJ_G0028079-6837.333MGP_CASTEiJ_G0034713Rbmx7337.333
MGP_CASTEiJ_G0028079-6832.000MGP_CASTEiJ_G0020591Pabpn15430.337
MGP_CASTEiJ_G0028079-8334.066MGP_CASTEiJ_G0021144Gm123556633.696
MGP_CASTEiJ_G0028079-8336.264MGP_CASTEiJ_G0022681Srsf37035.870

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