EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0028178 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 24344 bases
Position: chr4:140848720-140873063
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	1	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	2	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	3	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	4	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	5	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	6	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	7	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	8	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	9	10
MGP_CASTEiJ_P0069152	zf-C2H2	PF00096.26	2.9e-60	10	10
MGP_CASTEiJ_P0069152	zf-met	PF12874.7	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0069158	-	867	-	-	- (aa)	-	-
MGP_CASTEiJ_T0069156	-	785	-	-	- (aa)	-	-
MGP_CASTEiJ_T0069157	-	771	-	-	- (aa)	-	-
MGP_CASTEiJ_T0069154	-	2973	-	-	- (aa)	-	-
MGP_CASTEiJ_T0069155	-	338	-	-	- (aa)	-	-
MGP_CASTEiJ_T0069152	-	2722	XM_006538727	MGP_CASTEiJ_P0069152	794 (aa)	XP_006538790	Q60821
MGP_CASTEiJ_T0069153	-	3477	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0028178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0028178	Zbtb17	69	44.706	MGP_CASTEiJ_G0031027	Zfp420	97	44.706
MGP_CASTEiJ_G0028178	Zbtb17	52	43.144	MGP_CASTEiJ_G0033485	Zfp872	86	41.667
MGP_CASTEiJ_G0028178	Zbtb17	58	42.857	MGP_CASTEiJ_G0032059	Zfp768	52	42.231
MGP_CASTEiJ_G0028178	Zbtb17	55	43.322	MGP_CASTEiJ_G0017568	Zfp454	86	42.424
MGP_CASTEiJ_G0028178	Zbtb17	62	34.819	MGP_CASTEiJ_G0033000	Zfp319	91	37.805
MGP_CASTEiJ_G0028178	Zbtb17	56	35.083	MGP_CASTEiJ_G0026068	Zfp334	65	35.083
MGP_CASTEiJ_G0028178	Zbtb17	58	42.857	MGP_CASTEiJ_G0031153	Zfp715	75	56.410
MGP_CASTEiJ_G0028178	Zbtb17	63	42.604	MGP_CASTEiJ_G0019982	Zfp748	92	43.658
MGP_CASTEiJ_G0028178	Zbtb17	58	46.903	MGP_CASTEiJ_G0019986	-	88	46.903
MGP_CASTEiJ_G0028178	Zbtb17	61	42.727	MGP_CASTEiJ_G0023809	Zfp236	68	41.964
MGP_CASTEiJ_G0028178	Zbtb17	64	38.614	MGP_CASTEiJ_G0029798	Repin1	93	38.614
MGP_CASTEiJ_G0028178	Zbtb17	55	41.129	MGP_CASTEiJ_G0032061	-	62	42.308
MGP_CASTEiJ_G0028178	Zbtb17	55	41.129	MGP_CASTEiJ_G0032062	-	62	42.308
MGP_CASTEiJ_G0028178	Zbtb17	58	42.042	MGP_CASTEiJ_G0019963	Zfp759	87	42.560
MGP_CASTEiJ_G0028178	Zbtb17	79	32.955	MGP_CASTEiJ_G0020237	Zfp131	73	31.183
MGP_CASTEiJ_G0028178	Zbtb17	59	36.148	MGP_CASTEiJ_G0030966	Zfp59	80	40.529
MGP_CASTEiJ_G0028178	Zbtb17	59	36.986	MGP_CASTEiJ_G0017666	Zfp672	90	40.000
MGP_CASTEiJ_G0028178	Zbtb17	58	40.968	MGP_CASTEiJ_G0032779	Zfp882	85	42.985
MGP_CASTEiJ_G0028178	Zbtb17	58	42.012	MGP_CASTEiJ_G0032778	Zfp709	80	43.421
MGP_CASTEiJ_G0028178	Zbtb17	62	50.909	MGP_CASTEiJ_G0028615	Zbtb49	62	67.742
MGP_CASTEiJ_G0028178	Zbtb17	59	32.021	MGP_CASTEiJ_G0030898	Zfp574	71	38.532
MGP_CASTEiJ_G0028178	Zbtb17	72	34.627	MGP_CASTEiJ_G0022489	Zscan10	78	43.165
MGP_CASTEiJ_G0028178	Zbtb17	71	39.071	MGP_CASTEiJ_G0022483	Zfp945	93	39.931
MGP_CASTEiJ_G0028178	Zbtb17	54	46.512	MGP_CASTEiJ_G0033155	Zfp1	67	42.083
MGP_CASTEiJ_G0028178	Zbtb17	56	40.741	MGP_CASTEiJ_G0030643	Zfp865	78	35.743
MGP_CASTEiJ_G0028178	Zbtb17	56	44.086	MGP_CASTEiJ_G0030869	Zfp94	76	44.086
MGP_CASTEiJ_G0028178	Zbtb17	56	36.607	MGP_CASTEiJ_G0030866	Zfp108	60	43.440
MGP_CASTEiJ_G0028178	Zbtb17	61	43.939	MGP_CASTEiJ_G0030861	Zfp112	56	43.807
MGP_CASTEiJ_G0028178	Zbtb17	78	39.568	MGP_CASTEiJ_G0025790	Gzf1	83	39.568
MGP_CASTEiJ_G0028178	Zbtb17	55	41.083	MGP_CASTEiJ_G0017709	-	81	41.083
MGP_CASTEiJ_G0028178	Zbtb17	79	46.354	MGP_CASTEiJ_G0026290	Mynn	85	46.354
MGP_CASTEiJ_G0028178	Zbtb17	56	41.606	MGP_CASTEiJ_G0019962	Rslcan18	66	41.600
MGP_CASTEiJ_G0028178	Zbtb17	55	41.129	MGP_CASTEiJ_G0032063	-	62	42.308
MGP_CASTEiJ_G0028178	Zbtb17	62	42.899	MGP_CASTEiJ_G0022465	Zfp677	83	42.899
MGP_CASTEiJ_G0028178	Zbtb17	62	42.606	MGP_CASTEiJ_G0022467	Zfp51	82	41.888
MGP_CASTEiJ_G0028178	Zbtb17	61	40.576	MGP_CASTEiJ_G0033422	Zfp26	79	43.413