EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0028684 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 4035 bases
Position: chr5:64042040-64046074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0072010	Ribosomal_L6	PF00347.23	1.2e-32	1	2
MGP_CASTEiJ_P0072010	Ribosomal_L6	PF00347.23	1.2e-32	2	2
MGP_CASTEiJ_P0072014	Ribosomal_L6	PF00347.23	1.2e-32	1	2
MGP_CASTEiJ_P0072014	Ribosomal_L6	PF00347.23	1.2e-32	2	2
MGP_CASTEiJ_P0072017	Ribosomal_L6	PF00347.23	1.2e-32	1	2
MGP_CASTEiJ_P0072017	Ribosomal_L6	PF00347.23	1.2e-32	2	2
MGP_CASTEiJ_P0072008	Ribosomal_L6	PF00347.23	7.5e-27	1	2
MGP_CASTEiJ_P0072008	Ribosomal_L6	PF00347.23	7.5e-27	2	2
MGP_CASTEiJ_P0072011	Ribosomal_L6	PF00347.23	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0072014	-	679	-	MGP_CASTEiJ_P0072014	192 (aa)	-	-
MGP_CASTEiJ_T0072013	-	456	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072012	-	2557	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072011	-	2598	-	MGP_CASTEiJ_P0072011	107 (aa)	-	-
MGP_CASTEiJ_T0072010	-	738	-	MGP_CASTEiJ_P0072010	192 (aa)	-	-
MGP_CASTEiJ_T0072017	-	735	-	MGP_CASTEiJ_P0072017	192 (aa)	-	-
MGP_CASTEiJ_T0072016	-	702	-	MGP_CASTEiJ_P0072016	160 (aa)	-	-
MGP_CASTEiJ_T0072015	-	1584	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072007	-	428	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072008	-	1189	-	MGP_CASTEiJ_P0072008	166 (aa)	-	-
MGP_CASTEiJ_T0072009	-	387	-	MGP_CASTEiJ_P0072009	65 (aa)	-	-
MGP_CASTEiJ_T0072018	-	1641	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0028684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0028684	-	97	92.063	MGP_CASTEiJ_G0018164	Rpl9-ps1	54	91.346