EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0028695 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
173528 bases
Position
chr5:64746520-64920047
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0072091RRM_1PF00076.224.1e-3713
MGP_CASTEiJ_P0072091RRM_1PF00076.224.1e-3723
MGP_CASTEiJ_P0072091RRM_1PF00076.224.1e-3733
MGP_CASTEiJ_P0072085RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072085RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072085RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072086RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072086RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072086RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072087RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072087RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072087RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072088RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072088RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072088RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072089RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072089RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072089RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072090RRM_1PF00076.225.8e-3713
MGP_CASTEiJ_P0072090RRM_1PF00076.225.8e-3723
MGP_CASTEiJ_P0072090RRM_1PF00076.225.8e-3733
MGP_CASTEiJ_P0072093RRM_1PF00076.223e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0072096-452--- (aa)--
MGP_CASTEiJ_T0072088-4857-MGP_CASTEiJ_P0072088590 (aa)--
MGP_CASTEiJ_T0072089-3168-MGP_CASTEiJ_P0072089590 (aa)--
MGP_CASTEiJ_T0072095-332-MGP_CASTEiJ_P007209513 (aa)--
MGP_CASTEiJ_T0072094-504--- (aa)--
MGP_CASTEiJ_T0072093-703-MGP_CASTEiJ_P0072093158 (aa)--
MGP_CASTEiJ_T0072092-2396--- (aa)--
MGP_CASTEiJ_T0072091-1746-MGP_CASTEiJ_P0072091541 (aa)--
MGP_CASTEiJ_T0072090-2177-MGP_CASTEiJ_P0072090590 (aa)--
MGP_CASTEiJ_T0072097-464--- (aa)--
MGP_CASTEiJ_T0072085-4665XM_006503956MGP_CASTEiJ_P0072085590 (aa)XP_006504019Q91WT8
MGP_CASTEiJ_T0072086-5173-MGP_CASTEiJ_P0072086590 (aa)--
MGP_CASTEiJ_T0072087-4605-MGP_CASTEiJ_P0072087590 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0028695's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028695's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0028695Rbm478967.376MGP_CASTEiJ_G0024240A1cf7656.632
MGP_CASTEiJ_G0028695Rbm479473.649MGP_CASTEiJ_G0026493Rbm466672.468
MGP_CASTEiJ_G0028695Rbm478150.000MGP_CASTEiJ_G0023498Dnd15841.262
MGP_CASTEiJ_G0028695Rbm478858.451MGP_CASTEiJ_G0034108Syncrip7557.522

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