EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0028867 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 85276 bases
Position: chr5:93315138-93400413
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0072896	MMR_HSR1	PF01926.23	7e-07	1	1
MGP_CASTEiJ_P0072894	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_CASTEiJ_P0072892	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_CASTEiJ_P0072897	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_CASTEiJ_P0072899	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0072900	-	1119	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072893	-	640	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072892	-	5018	XM_006535104	MGP_CASTEiJ_P0072892	429 (aa)	XP_006535161	Q8C1B7
MGP_CASTEiJ_T0072897	-	2426	-	MGP_CASTEiJ_P0072897	431 (aa)	-	-
MGP_CASTEiJ_T0072896	-	1790	-	MGP_CASTEiJ_P0072896	425 (aa)	-	-
MGP_CASTEiJ_T0072895	-	1066	-	MGP_CASTEiJ_P0072895	204 (aa)	-	-
MGP_CASTEiJ_T0072894	-	3492	-	MGP_CASTEiJ_P0072894	425 (aa)	-	-
MGP_CASTEiJ_T0072899	-	1380	-	MGP_CASTEiJ_P0072899	432 (aa)	-	-
MGP_CASTEiJ_T0072898	-	434	-	MGP_CASTEiJ_P0072898	97 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0028867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0028867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0028867	Sept11	60	38.077	MGP_CASTEiJ_G0021739	Sept12	82	37.931
MGP_CASTEiJ_G0028867	Sept11	99	79.157	MGP_CASTEiJ_G0017614	Sept8	88	81.915
MGP_CASTEiJ_G0028867	Sept11	99	39.954	MGP_CASTEiJ_G0033500	Sept7	80	41.737
MGP_CASTEiJ_G0028867	Sept11	76	41.493	MGP_CASTEiJ_G0021876	Sept5	90	40.828
MGP_CASTEiJ_G0028867	Sept11	69	43.234	MGP_CASTEiJ_G0015692	Sept2	100	42.202
MGP_CASTEiJ_G0028867	Sept11	69	44.000	MGP_CASTEiJ_G0021397	Sept3	89	44.000
MGP_CASTEiJ_G0028867	Sept11	76	40.762	MGP_CASTEiJ_G0032053	Sept1	100	40.816
MGP_CASTEiJ_G0028867	Sept11	100	82.201	MGP_CASTEiJ_G0034606	Sept6	100	82.028
MGP_CASTEiJ_G0028867	Sept11	98	72.771	MGP_CASTEiJ_G0016585	Sept10	85	76.712
MGP_CASTEiJ_G0028867	Sept11	67	42.953	MGP_CASTEiJ_G0018749	Sept9	81	46.970
MGP_CASTEiJ_G0028867	Sept11	67	43.878	MGP_CASTEiJ_G0018215	Sept4	93	43.878