EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0028892 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 6077 bases
Position: chr5:99922562-99928638
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0072993	RRM_1	PF00076.22	2.4e-33	1	2
MGP_CASTEiJ_P0072993	RRM_1	PF00076.22	2.4e-33	2	2
MGP_CASTEiJ_P0072992	RRM_1	PF00076.22	5.4e-33	1	2
MGP_CASTEiJ_P0072992	RRM_1	PF00076.22	5.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0072996	-	1477	-	MGP_CASTEiJ_P0072996	100 (aa)	-	-
MGP_CASTEiJ_T0072997	-	846	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072994	-	2143	-	MGP_CASTEiJ_P0072994	420 (aa)	-	-
MGP_CASTEiJ_T0072995	-	884	-	-	- (aa)	-	-
MGP_CASTEiJ_T0072992	-	2752	-	MGP_CASTEiJ_P0072992	420 (aa)	-	-
MGP_CASTEiJ_T0072993	-	2374	-	MGP_CASTEiJ_P0072993	322 (aa)	-	-
MGP_CASTEiJ_T0072991	-	1842	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0028892	Hnrnpdl	89	64.236	MGP_CASTEiJ_G0028890	Hnrnpd	80	72.674
MGP_CASTEiJ_G0028892	Hnrnpdl	76	36.437	MGP_CASTEiJ_G0016822	-	99	39.881
MGP_CASTEiJ_G0028892	Hnrnpdl	64	30.000	MGP_CASTEiJ_G0028244	Tardbp	77	31.447
MGP_CASTEiJ_G0028892	Hnrnpdl	54	36.709	MGP_CASTEiJ_G0016816	Cirbp	73	36.709
MGP_CASTEiJ_G0028892	Hnrnpdl	75	39.676	MGP_CASTEiJ_G0029073	Msi1	58	48.052
MGP_CASTEiJ_G0028892	Hnrnpdl	89	57.292	MGP_CASTEiJ_G0017584	Hnrnpab	82	58.419
MGP_CASTEiJ_G0028892	Hnrnpdl	56	40.940	MGP_CASTEiJ_G0029831	Hnrnpa2b1	69	40.940
MGP_CASTEiJ_G0028892	Hnrnpdl	78	41.634	MGP_CASTEiJ_G0018234	Msi2	100	54.867
MGP_CASTEiJ_G0028892	Hnrnpdl	51	34.706	MGP_CASTEiJ_G0019890	Hnrnpa0	56	34.706