EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029069 (Gene tree)
Gene ID: -
Gene Symbol: Srsf9
Alias: 25kDa|2610029M16Rik|SRp30c|Sfrs9
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 6782 bases
Position: chr5:116555483-116562264
Accession: 104896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0073874	RRM_1	PF00076.22	3.7e-33	1	2
MGP_CASTEiJ_P0073874	RRM_1	PF00076.22	3.7e-33	2	2
MGP_CASTEiJ_P0073877	RRM_1	PF00076.22	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0073876	-	474	-	-	- (aa)	-	-
MGP_CASTEiJ_T0073877	-	770	-	MGP_CASTEiJ_P0073877	158 (aa)	-	-
MGP_CASTEiJ_T0073874	-	1165	XM_011248158	MGP_CASTEiJ_P0073874	222 (aa)	XP_011246460	Q9D0B0
MGP_CASTEiJ_T0073875	-	904	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029069	Srsf9	78	70.330	MGP_CASTEiJ_G0018229	Srsf1	79	79.762
MGP_CASTEiJ_G0029069	Srsf9	70	38.674	MGP_CASTEiJ_G0025991	Srsf6	51	47.297