EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029079 (Gene tree)
Gene ID: -
Gene Symbol: Rab35
Alias: 9530019H02Rik|AU040256|H-ray|RAB1C|RAY
Full Name: RAB35%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 17549 bases
Position: chr5:116921166-116938714
Accession: 1924657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0073923	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0073924	-	963	-	MGP_CASTEiJ_P0073924	55 (aa)	-	-
MGP_CASTEiJ_T0073923	-	2613	-	MGP_CASTEiJ_P0073923	201 (aa)	-	Q6PHN9

Gene Model

Click here to download MGP_CASTEiJ_G0029079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029079	Rab35	78	48.734	MGP_CASTEiJ_G0020554	Rab2b	81	49.359
MGP_CASTEiJ_G0029079	Rab35	82	44.444	MGP_CASTEiJ_G0034827	Rab39b	84	43.017
MGP_CASTEiJ_G0029079	Rab35	76	37.419	MGP_CASTEiJ_G0026847	Nras	96	37.671
MGP_CASTEiJ_G0029079	Rab35	95	34.872	MGP_CASTEiJ_G0030093	Rab7	91	48.611
MGP_CASTEiJ_G0029079	Rab35	59	32.576	MGP_CASTEiJ_G0026195	Arfrp1	87	35.185
MGP_CASTEiJ_G0029079	Rab35	76	38.961	MGP_CASTEiJ_G0034188	Rab6b	74	38.961
MGP_CASTEiJ_G0029079	Rab35	96	35.052	MGP_CASTEiJ_G0026136	Rab22a	79	40.260
MGP_CASTEiJ_G0029079	Rab35	77	47.500	MGP_CASTEiJ_G0026366	Rab33b	70	47.500
MGP_CASTEiJ_G0029079	Rab35	96	37.436	MGP_CASTEiJ_G0018472	Rab5c	89	37.113
MGP_CASTEiJ_G0029079	Rab35	100	53.465	MGP_CASTEiJ_G0023899	Rab1b	81	63.580
MGP_CASTEiJ_G0029079	Rab35	94	43.455	MGP_CASTEiJ_G0023193	Rab12	59	45.614
MGP_CASTEiJ_G0029079	Rab35	83	31.325	MGP_CASTEiJ_G0021498	Rabl2	73	31.325
MGP_CASTEiJ_G0029079	Rab35	97	33.649	MGP_CASTEiJ_G0016681	Rab36	62	38.554
MGP_CASTEiJ_G0029079	Rab35	100	53.960	MGP_CASTEiJ_G0017380	Rab1a	99	53.960
MGP_CASTEiJ_G0029079	Rab35	96	35.610	MGP_CASTEiJ_G0018075	Rab34	79	35.610
MGP_CASTEiJ_G0029079	Rab35	99	43.062	MGP_CASTEiJ_G0022763	Rab11b	96	43.062
MGP_CASTEiJ_G0029079	Rab35	85	35.227	MGP_CASTEiJ_G0028465	Rheb	88	35.503
MGP_CASTEiJ_G0029079	Rab35	86	50.286	MGP_CASTEiJ_G0031541	Rab30	86	50.286
MGP_CASTEiJ_G0029079	Rab35	95	46.632	MGP_CASTEiJ_G0023338	Rab18	84	48.851
MGP_CASTEiJ_G0029079	Rab35	80	34.146	MGP_CASTEiJ_G0034164	Mras	78	34.146
MGP_CASTEiJ_G0029079	Rab35	91	48.148	MGP_CASTEiJ_G0034658	Rab33a	79	48.148
MGP_CASTEiJ_G0029079	Rab35	96	34.536	MGP_CASTEiJ_G0023184	Rab31	97	35.204
MGP_CASTEiJ_G0029079	Rab35	94	46.032	MGP_CASTEiJ_G0019160	Rab15	89	46.032
MGP_CASTEiJ_G0029079	Rab35	95	33.684	MGP_CASTEiJ_G0015254	Rab23	75	34.831
MGP_CASTEiJ_G0029079	Rab35	86	33.143	MGP_CASTEiJ_G0030551	Kras	94	32.124
MGP_CASTEiJ_G0029079	Rab35	91	44.565	MGP_CASTEiJ_G0026561	Rab25	95	39.901
MGP_CASTEiJ_G0029079	Rab35	96	37.949	MGP_CASTEiJ_G0017200	Rab5b	90	37.949
MGP_CASTEiJ_G0029079	Rab35	78	48.101	MGP_CASTEiJ_G0027193	Rab2a	75	48.101
MGP_CASTEiJ_G0029079	Rab35	57	30.769	MGP_CASTEiJ_G0019000	Arl4a	59	30.769
MGP_CASTEiJ_G0029079	Rab35	97	40.609	MGP_CASTEiJ_G0018675	Rab37	89	40.609
MGP_CASTEiJ_G0029079	Rab35	97	37.500	MGP_CASTEiJ_G0035224	Rab9	97	37.500
MGP_CASTEiJ_G0029079	Rab35	97	35.468	MGP_CASTEiJ_G0035073	Rab9b	97	35.000
MGP_CASTEiJ_G0029079	Rab35	74	30.380	MGP_CASTEiJ_G0028739	Rasl11b	66	30.380
MGP_CASTEiJ_G0029079	Rab35	99	42.512	MGP_CASTEiJ_G0033947	Rab11a	90	49.635
MGP_CASTEiJ_G0029079	Rab35	96	37.436	MGP_CASTEiJ_G0023094	Rab5a	90	37.436
MGP_CASTEiJ_G0029079	Rab35	79	45.283	MGP_CASTEiJ_G0024846	Rab14	93	45.390
MGP_CASTEiJ_G0029079	Rab35	76	36.774	MGP_CASTEiJ_G0032241	Hras	81	36.774