EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029104 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 88080 bases
Position: chr5:121794542-121882621
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0074062	RRM_1	PF00076.22	1.2e-85	1	5
MGP_CASTEiJ_P0074062	RRM_1	PF00076.22	1.2e-85	2	5
MGP_CASTEiJ_P0074062	RRM_1	PF00076.22	1.2e-85	3	5
MGP_CASTEiJ_P0074062	RRM_1	PF00076.22	1.2e-85	4	5
MGP_CASTEiJ_P0074062	RRM_1	PF00076.22	1.2e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0074062	-	4019	-	MGP_CASTEiJ_P0074062	955 (aa)	-	Q8R3C6
MGP_CASTEiJ_T0074063	-	455	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074064	-	3909	-	MGP_CASTEiJ_P0074064	873 (aa)	-	-
MGP_CASTEiJ_T0074065	-	600	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074066	-	1396	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074067	-	635	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074068	-	485	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074069	-	1933	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074071	-	360	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074070	-	391	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029104	Rbm19	70	34.667	MGP_CASTEiJ_G0023577	Pabpc2	59	34.667
MGP_CASTEiJ_G0029104	Rbm19	72	36.066	MGP_CASTEiJ_G0026012	Pabpc1l	60	35.484
MGP_CASTEiJ_G0029104	Rbm19	63	34.667	MGP_CASTEiJ_G0022384	Pabpc6	57	34.667