EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0029139 (Gene tree)
Gene ID
-
Gene Symbol
Atxn2
Alias
9630045M23Rik|ATX2|AW544490|Sca2
Full Name
ataxin 2
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
124868 bases
Position
chr5:123650902-123775769
Accession
1277223
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0074228PAM2PF07145.159.1e-0711
MGP_CASTEiJ_P0074226PAM2PF07145.151.7e-0611
MGP_CASTEiJ_P0074231PAM2PF07145.151.9e-0611
MGP_CASTEiJ_P0074228LsmADPF06741.138.3e-1611
MGP_CASTEiJ_P0074226LsmADPF06741.131.4e-1511
MGP_CASTEiJ_P0074229LsmADPF06741.133.7e-0711
MGP_CASTEiJ_P0074226SM-ATXPF14438.67.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0074231-2343-MGP_CASTEiJ_P0074231662 (aa)--
MGP_CASTEiJ_T0074232-1003--- (aa)--
MGP_CASTEiJ_T0074240-482--- (aa)--
MGP_CASTEiJ_T0074241-578--- (aa)--
MGP_CASTEiJ_T0074242-388-MGP_CASTEiJ_P007424296 (aa)--
MGP_CASTEiJ_T0074230-3130--- (aa)--
MGP_CASTEiJ_T0074243-411-MGP_CASTEiJ_P007424363 (aa)--
MGP_CASTEiJ_T0074226-4335-MGP_CASTEiJ_P00742261249 (aa)--
MGP_CASTEiJ_T0074227-441--- (aa)--
MGP_CASTEiJ_T0074233-756--- (aa)--
MGP_CASTEiJ_T0074225-461--- (aa)--
MGP_CASTEiJ_T0074235-754--- (aa)--
MGP_CASTEiJ_T0074234-240--- (aa)--
MGP_CASTEiJ_T0074237-891-MGP_CASTEiJ_P0074237234 (aa)--
MGP_CASTEiJ_T0074236-6944--- (aa)--
MGP_CASTEiJ_T0074239-397-MGP_CASTEiJ_P007423965 (aa)--
MGP_CASTEiJ_T0074238-1465--- (aa)--
MGP_CASTEiJ_T0074228-3293-MGP_CASTEiJ_P0074228929 (aa)--
MGP_CASTEiJ_T0074229-990-MGP_CASTEiJ_P0074229329 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0029139's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029139's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0029139Atxn29539.432MGP_CASTEiJ_G0032010Atxn2l8055.682

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