EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029202 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 15933 bases
Position: chr5:126726720-126742652
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0074662	ResIII	PF04851.15	5.3e-07	1	1
MGP_CASTEiJ_P0074660	ResIII	PF04851.15	8.1e-07	1	1
MGP_CASTEiJ_P0074660	DEAD	PF00270.29	1.1e-41	1	1
MGP_CASTEiJ_P0074662	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0074666	-	824	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074664	-	477	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074665	-	1433	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074662	-	1857	-	MGP_CASTEiJ_P0074662	618 (aa)	-	-
MGP_CASTEiJ_T0074663	-	445	-	-	- (aa)	-	-
MGP_CASTEiJ_T0074660	-	2801	-	MGP_CASTEiJ_P0074660	600 (aa)	-	Q6ZPL9
MGP_CASTEiJ_T0074661	-	3519	-	MGP_CASTEiJ_P0074661	135 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029202	Ddx55	75	31.721	MGP_CASTEiJ_G0024730	Ddx31	74	31.721
MGP_CASTEiJ_G0029202	Ddx55	61	31.234	MGP_CASTEiJ_G0033719	Ddx6	74	31.234
MGP_CASTEiJ_G0029202	Ddx55	59	32.687	MGP_CASTEiJ_G0021336	Ddx17	53	32.687
MGP_CASTEiJ_G0029202	Ddx55	59	30.362	MGP_CASTEiJ_G0021938	Eif4a2	93	30.362
MGP_CASTEiJ_G0029202	Ddx55	58	33.056	MGP_CASTEiJ_G0032713	Ddx49	92	33.238
MGP_CASTEiJ_G0029202	Ddx55	59	35.635	MGP_CASTEiJ_G0019865	Ddx41	55	35.440
MGP_CASTEiJ_G0029202	Ddx55	59	35.733	MGP_CASTEiJ_G0016265	D1Pas1	54	35.733
MGP_CASTEiJ_G0029202	Ddx55	58	35.977	MGP_CASTEiJ_G0030485	Ddx47	81	35.977
MGP_CASTEiJ_G0029202	Ddx55	63	31.000	MGP_CASTEiJ_G0018172	Ddx52	62	31.000
MGP_CASTEiJ_G0029202	Ddx55	60	30.886	MGP_CASTEiJ_G0033086	Ddx28	69	30.886
MGP_CASTEiJ_G0029202	Ddx55	75	38.631	MGP_CASTEiJ_G0033812	Ddx10	50	38.631
MGP_CASTEiJ_G0029202	Ddx55	58	31.429	MGP_CASTEiJ_G0015890	Ddx59	54	31.429
MGP_CASTEiJ_G0029202	Ddx55	59	32.044	MGP_CASTEiJ_G0034068	Ddx43	53	32.044
MGP_CASTEiJ_G0029202	Ddx55	79	36.042	MGP_CASTEiJ_G0015762	Ddx18	68	36.192
MGP_CASTEiJ_G0029202	Ddx55	59	35.200	MGP_CASTEiJ_G0034550	Ddx3x	54	35.106