EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029317 (Gene tree)
Gene ID: -
Gene Symbol: Plod3
Alias: AI414586|LH3|lysyl hydroxylase 3
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 9707 bases
Position: chr5:139990170-139999876
Accession: 1347008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0075312	2OG-FeII_Oxy	PF03171.20	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0075313	-	2362	-	-	- (aa)	-	-
MGP_CASTEiJ_T0075312	-	3280	XM_006504423	MGP_CASTEiJ_P0075312	741 (aa)	XP_006504486	Q9R0E1
MGP_CASTEiJ_T0075315	-	933	-	-	- (aa)	-	-
MGP_CASTEiJ_T0075314	-	2869	-	-	- (aa)	-	-
MGP_CASTEiJ_T0075317	-	603	-	MGP_CASTEiJ_P0075317	200 (aa)	-	-
MGP_CASTEiJ_T0075316	-	842	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029317	Plod3	95	60.511	MGP_CASTEiJ_G0028225	Plod1	97	60.511
MGP_CASTEiJ_G0029317	Plod3	100	57.895	MGP_CASTEiJ_G0034126	Plod2	95	59.972