EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0029482 (Gene tree)
Gene ID: -
Gene Symbol: Polr1d
Alias: 1110003G10Rik|16kDa|AC19|RPA16|Rpo1-3|Rpo1-3 {ECO:0000313|EMBL:EDL05825.1,GN ECO:0000313|MGI:MGI:108403}|Rpo1-3 {ECO:0000313|EMBL:EDL05826.1,GN ECO:0000313|MGI:MGI:108403}|mRPA16
Full Name: polymerase (RNA) I polypeptide D
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 35253 bases
Position: chr5:151250115-151285367
Accession: 108403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0076095	RNA_pol_L_2	PF13656.6	1.8e-27	1	1
MGP_CASTEiJ_P0076095	RNA_pol_L	PF01193.24	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0076097	-	1166	-	MGP_CASTEiJ_P0076097	33 (aa)	-	-
MGP_CASTEiJ_T0076096	-	1136	-	MGP_CASTEiJ_P0076096	126 (aa)	-	-
MGP_CASTEiJ_T0076095	-	1196	-	MGP_CASTEiJ_P0076095	133 (aa)	-	P97304
MGP_CASTEiJ_T0076100	-	867	-	-	- (aa)	-	-
MGP_CASTEiJ_T0076099	-	363	-	-	- (aa)	-	-
MGP_CASTEiJ_T0076098	-	1349	-	MGP_CASTEiJ_P0076098	42 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029482	Polr1d	77	33.010	MGP_CASTEiJ_G0029304	Polr2j	85	33.010