EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029606 (Gene tree)
Gene ID: -
Gene Symbol: Arf5
Alias: -
Full Name: ADP-ribosylation factor 5
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 3202 bases
Position: chr6:25666085-25669286
Accession: 99434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0076763	MMR_HSR1	PF01926.23	6.3e-05	1	1
MGP_CASTEiJ_P0076764	MMR_HSR1	PF01926.23	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0076765	-	924	-	-	- (aa)	-	-
MGP_CASTEiJ_T0076764	-	830	-	MGP_CASTEiJ_P0076764	180 (aa)	-	-
MGP_CASTEiJ_T0076763	-	1110	-	MGP_CASTEiJ_P0076763	180 (aa)	-	P84084

Gene Model

Click here to download MGP_CASTEiJ_G0029606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029606	Arf5	90	45.455	MGP_CASTEiJ_G0026458	Arl14	86	45.455
MGP_CASTEiJ_G0029606	Arf5	100	44.444	MGP_CASTEiJ_G0024562	Arl5b	99	44.444
MGP_CASTEiJ_G0029606	Arf5	95	46.328	MGP_CASTEiJ_G0015639	Arl4c	92	46.328
MGP_CASTEiJ_G0029606	Arf5	94	34.225	MGP_CASTEiJ_G0026195	Arfrp1	90	38.393
MGP_CASTEiJ_G0029606	Arf5	92	46.386	MGP_CASTEiJ_G0023957	Arl2	90	46.386
MGP_CASTEiJ_G0029606	Arf5	92	44.242	MGP_CASTEiJ_G0024407	Arl3	91	44.242
MGP_CASTEiJ_G0029606	Arf5	97	42.541	MGP_CASTEiJ_G0019000	Arl4a	91	42.541
MGP_CASTEiJ_G0029606	Arf5	87	60.510	MGP_CASTEiJ_G0016961	Arl1	94	59.302
MGP_CASTEiJ_G0029606	Arf5	70	35.938	MGP_CASTEiJ_G0019834	Arl10	62	35.938
MGP_CASTEiJ_G0029606	Arf5	92	41.317	MGP_CASTEiJ_G0020697	Arl11	95	41.317
MGP_CASTEiJ_G0029606	Arf5	91	36.527	MGP_CASTEiJ_G0022188	Arl6	90	36.527
MGP_CASTEiJ_G0029606	Arf5	100	78.889	MGP_CASTEiJ_G0021565	Arf3	99	78.889
MGP_CASTEiJ_G0029606	Arf5	96	42.197	MGP_CASTEiJ_G0018355	Arl5c	96	42.197
MGP_CASTEiJ_G0029606	Arf5	96	31.609	MGP_CASTEiJ_G0030189	Arl8b	94	31.609
MGP_CASTEiJ_G0029606	Arf5	96	30.460	MGP_CASTEiJ_G0015866	Arl8a	94	30.460