EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029695 (Gene tree)
Gene ID: -
Gene Symbol: Mkrn1
Alias: RFP
Full Name: makorin%2C ring finger protein%2C 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 25710 bases
Position: chr6:37197094-37222803
Accession: 1859353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0077277	zf-CCCH	PF00642.24	1.4e-17	1	3
MGP_CASTEiJ_P0077277	zf-CCCH	PF00642.24	1.4e-17	2	3
MGP_CASTEiJ_P0077277	zf-CCCH	PF00642.24	1.4e-17	3	3
MGP_CASTEiJ_P0077281	zf-CCCH	PF00642.24	1.9e-16	1	3
MGP_CASTEiJ_P0077281	zf-CCCH	PF00642.24	1.9e-16	2	3
MGP_CASTEiJ_P0077281	zf-CCCH	PF00642.24	1.9e-16	3	3
MGP_CASTEiJ_P0077278	zf-CCCH	PF00642.24	2e-15	1	2
MGP_CASTEiJ_P0077278	zf-CCCH	PF00642.24	2e-15	2	2
MGP_CASTEiJ_P0077280	zf-CCCH	PF00642.24	1.6e-12	1	2
MGP_CASTEiJ_P0077280	zf-CCCH	PF00642.24	1.6e-12	2	2
MGP_CASTEiJ_P0077283	zf-CCCH	PF00642.24	1.3e-10	1	2
MGP_CASTEiJ_P0077283	zf-CCCH	PF00642.24	1.3e-10	2	2
MGP_CASTEiJ_P0077284	zf-CCCH	PF00642.24	3.3e-09	1	2
MGP_CASTEiJ_P0077284	zf-CCCH	PF00642.24	3.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0077284	-	751	-	MGP_CASTEiJ_P0077284	196 (aa)	-	-
MGP_CASTEiJ_T0077277	-	3043	XM_006506396	MGP_CASTEiJ_P0077277	481 (aa)	XP_006506459	Q9QXP6
MGP_CASTEiJ_T0077278	-	2989	-	MGP_CASTEiJ_P0077278	417 (aa)	-	-
MGP_CASTEiJ_T0077279	-	773	-	MGP_CASTEiJ_P0077279	206 (aa)	-	-
MGP_CASTEiJ_T0077281	-	1511	-	MGP_CASTEiJ_P0077281	329 (aa)	-	-
MGP_CASTEiJ_T0077280	-	1485	-	MGP_CASTEiJ_P0077280	343 (aa)	-	-
MGP_CASTEiJ_T0077283	-	542	-	MGP_CASTEiJ_P0077283	180 (aa)	-	-
MGP_CASTEiJ_T0077282	-	584	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029695	Mkrn1	100	46.204	MGP_CASTEiJ_G0031361	Mkrn3	83	47.414
MGP_CASTEiJ_G0029695	Mkrn1	93	44.335	MGP_CASTEiJ_G0030238	Mkrn2	95	45.679