EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029798 (Gene tree)
Gene ID: -
Gene Symbol: Repin1
Alias: AI425994|AP4|Ap4|E430037F08Rik|Zfp-464|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 5186 bases
Position: chr6:46711492-46716677
Accession: 1889817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	1	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	2	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	3	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	4	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	5	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	6	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	7	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	8	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	9	10
MGP_CASTEiJ_P0077605	zf-C2H2	PF00096.26	9.8e-68	10	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	1	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	2	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	3	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	4	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	5	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	6	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	7	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	8	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	9	10
MGP_CASTEiJ_P0077606	zf-C2H2	PF00096.26	9.8e-68	10	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	1	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	2	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	3	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	4	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	5	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	6	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	7	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	8	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	9	10
MGP_CASTEiJ_P0077608	zf-C2H2	PF00096.26	4.8e-67	10	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	1	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	2	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	3	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	4	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	5	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	6	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	7	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	8	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	9	10
MGP_CASTEiJ_P0077609	zf-C2H2	PF00096.26	5.2e-67	10	10
MGP_CASTEiJ_P0077607	zf-C2H2	PF00096.26	2.7e-32	1	5
MGP_CASTEiJ_P0077607	zf-C2H2	PF00096.26	2.7e-32	2	5
MGP_CASTEiJ_P0077607	zf-C2H2	PF00096.26	2.7e-32	3	5
MGP_CASTEiJ_P0077607	zf-C2H2	PF00096.26	2.7e-32	4	5
MGP_CASTEiJ_P0077607	zf-C2H2	PF00096.26	2.7e-32	5	5
MGP_CASTEiJ_P0077607	zf-met	PF12874.7	6.2e-07	1	1
MGP_CASTEiJ_P0077605	zf-met	PF12874.7	2.4e-06	1	1
MGP_CASTEiJ_P0077606	zf-met	PF12874.7	2.4e-06	1	1
MGP_CASTEiJ_P0077608	zf-met	PF12874.7	9.8e-06	1	1
MGP_CASTEiJ_P0077609	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0077607	-	1265	-	MGP_CASTEiJ_P0077607	360 (aa)	-	-
MGP_CASTEiJ_T0077605	-	3144	-	MGP_CASTEiJ_P0077605	545 (aa)	-	Q5U4E2
MGP_CASTEiJ_T0077613	-	989	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077610	-	656	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077606	-	2958	-	MGP_CASTEiJ_P0077606	545 (aa)	-	-
MGP_CASTEiJ_T0077609	-	3056	-	MGP_CASTEiJ_P0077609	601 (aa)	-	-
MGP_CASTEiJ_T0077608	-	3137	-	MGP_CASTEiJ_P0077608	598 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029798	Repin1	89	38.710	MGP_CASTEiJ_G0031153	Zfp715	85	58.140
MGP_CASTEiJ_G0029798	Repin1	95	38.889	MGP_CASTEiJ_G0028615	Zbtb49	60	47.222
MGP_CASTEiJ_G0029798	Repin1	92	40.404	MGP_CASTEiJ_G0032061	-	66	42.081
MGP_CASTEiJ_G0029798	Repin1	55	46.341	MGP_CASTEiJ_G0022472	Gm10226	100	48.193
MGP_CASTEiJ_G0029798	Repin1	93	31.560	MGP_CASTEiJ_G0019982	Zfp748	93	32.535
MGP_CASTEiJ_G0029798	Repin1	87	38.710	MGP_CASTEiJ_G0030643	Zfp865	84	32.090
MGP_CASTEiJ_G0029798	Repin1	55	34.112	MGP_CASTEiJ_G0030646	Zfp784	74	38.150
MGP_CASTEiJ_G0029798	Repin1	91	34.307	MGP_CASTEiJ_G0030898	Zfp574	97	34.430
MGP_CASTEiJ_G0029798	Repin1	84	31.119	MGP_CASTEiJ_G0033000	Zfp319	87	31.818
MGP_CASTEiJ_G0029798	Repin1	92	45.550	MGP_CASTEiJ_G0030635	Zfp628	59	45.545
MGP_CASTEiJ_G0029798	Repin1	92	35.635	MGP_CASTEiJ_G0017568	Zfp454	86	36.599
MGP_CASTEiJ_G0029798	Repin1	93	46.711	MGP_CASTEiJ_G0031027	Zfp420	98	46.711
MGP_CASTEiJ_G0029798	Repin1	94	33.159	MGP_CASTEiJ_G0033485	Zfp872	80	33.159
MGP_CASTEiJ_G0029798	Repin1	91	35.401	MGP_CASTEiJ_G0022465	Zfp677	80	37.884
MGP_CASTEiJ_G0029798	Repin1	92	35.556	MGP_CASTEiJ_G0022467	Zfp51	80	35.556
MGP_CASTEiJ_G0029798	Repin1	93	38.614	MGP_CASTEiJ_G0028178	Zbtb17	64	38.614
MGP_CASTEiJ_G0029798	Repin1	93	33.202	MGP_CASTEiJ_G0019986	-	96	32.809
MGP_CASTEiJ_G0029798	Repin1	88	45.000	MGP_CASTEiJ_G0032059	Zfp768	51	47.090
MGP_CASTEiJ_G0029798	Repin1	90	46.584	MGP_CASTEiJ_G0026290	Mynn	52	44.503
MGP_CASTEiJ_G0029798	Repin1	95	46.774	MGP_CASTEiJ_G0019561	Zkscan4	57	46.774
MGP_CASTEiJ_G0029798	Repin1	97	35.361	MGP_CASTEiJ_G0033422	Zfp26	79	35.913
MGP_CASTEiJ_G0029798	Repin1	95	36.293	MGP_CASTEiJ_G0026068	Zfp334	70	38.528
MGP_CASTEiJ_G0029798	Repin1	92	40.404	MGP_CASTEiJ_G0032062	-	66	42.081
MGP_CASTEiJ_G0029798	Repin1	92	40.404	MGP_CASTEiJ_G0032063	-	66	42.081
MGP_CASTEiJ_G0029798	Repin1	95	37.968	MGP_CASTEiJ_G0019962	Rslcan18	74	37.968
MGP_CASTEiJ_G0029798	Repin1	92	33.411	MGP_CASTEiJ_G0019963	Zfp759	90	34.568
MGP_CASTEiJ_G0029798	Repin1	90	47.287	MGP_CASTEiJ_G0028956	Gfi1	99	47.287
MGP_CASTEiJ_G0029798	Repin1	84	42.069	MGP_CASTEiJ_G0029924	Prdm5	68	42.361
MGP_CASTEiJ_G0029798	Repin1	96	40.659	MGP_CASTEiJ_G0026106	Zfp64	74	40.659
MGP_CASTEiJ_G0029798	Repin1	94	58.333	MGP_CASTEiJ_G0019990	Zfp493	67	58.333
MGP_CASTEiJ_G0029798	Repin1	94	42.083	MGP_CASTEiJ_G0025643	Zfp661	75	42.083
MGP_CASTEiJ_G0029798	Repin1	100	37.079	MGP_CASTEiJ_G0017709	-	80	37.500
MGP_CASTEiJ_G0029798	Repin1	100	47.368	MGP_CASTEiJ_G0030265	Zfp637	84	53.704
MGP_CASTEiJ_G0029798	Repin1	93	35.652	MGP_CASTEiJ_G0022483	Zfp945	87	32.411
MGP_CASTEiJ_G0029798	Repin1	92	36.705	MGP_CASTEiJ_G0022489	Zscan10	78	34.906
MGP_CASTEiJ_G0029798	Repin1	92	36.017	MGP_CASTEiJ_G0030866	Zfp108	73	36.325
MGP_CASTEiJ_G0029798	Repin1	93	40.132	MGP_CASTEiJ_G0030867	Zfp93	74	40.132
MGP_CASTEiJ_G0029798	Repin1	93	37.188	MGP_CASTEiJ_G0030861	Zfp112	53	37.188
MGP_CASTEiJ_G0029798	Repin1	92	39.037	MGP_CASTEiJ_G0030868	Zfp61	52	37.107
MGP_CASTEiJ_G0029798	Repin1	97	39.937	MGP_CASTEiJ_G0030869	Zfp94	76	39.937
MGP_CASTEiJ_G0029798	Repin1	91	35.831	MGP_CASTEiJ_G0017666	Zfp672	92	41.250
MGP_CASTEiJ_G0029798	Repin1	92	39.362	MGP_CASTEiJ_G0033155	Zfp1	63	39.362
MGP_CASTEiJ_G0029798	Repin1	71	33.529	MGP_CASTEiJ_G0021834	Hic2	50	33.571
MGP_CASTEiJ_G0029798	Repin1	97	34.157	MGP_CASTEiJ_G0030966	Zfp59	85	36.937
MGP_CASTEiJ_G0029798	Repin1	92	45.402	MGP_CASTEiJ_G0021271	Zfp251	71	39.241
MGP_CASTEiJ_G0029798	Repin1	94	33.735	MGP_CASTEiJ_G0032778	Zfp709	89	33.125
MGP_CASTEiJ_G0029798	Repin1	100	31.719	MGP_CASTEiJ_G0032779	Zfp882	87	31.250
MGP_CASTEiJ_G0029798	Repin1	99	41.667	MGP_CASTEiJ_G0023809	Zfp236	97	42.735