EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0029831 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 8960 bases
Position: chr6:49753486-49762445
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0077744	RRM_1	PF00076.22	3.4e-32	1	2
MGP_CASTEiJ_P0077744	RRM_1	PF00076.22	3.4e-32	2	2
MGP_CASTEiJ_P0077750	RRM_1	PF00076.22	3.4e-32	1	2
MGP_CASTEiJ_P0077750	RRM_1	PF00076.22	3.4e-32	2	2
MGP_CASTEiJ_P0077747	RRM_1	PF00076.22	5.1e-32	1	2
MGP_CASTEiJ_P0077747	RRM_1	PF00076.22	5.1e-32	2	2
MGP_CASTEiJ_P0077751	RRM_1	PF00076.22	5.1e-32	1	2
MGP_CASTEiJ_P0077751	RRM_1	PF00076.22	5.1e-32	2	2
MGP_CASTEiJ_P0077749	RRM_1	PF00076.22	5.6e-32	1	2
MGP_CASTEiJ_P0077749	RRM_1	PF00076.22	5.6e-32	2	2
MGP_CASTEiJ_P0077753	RRM_1	PF00076.22	1.9e-15	1	1
MGP_CASTEiJ_P0077753	HnRNPA1	PF11627.8	2e-16	1	1
MGP_CASTEiJ_P0077744	HnRNPA1	PF11627.8	2.2e-06	1	1
MGP_CASTEiJ_P0077750	HnRNPA1	PF11627.8	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0077744	-	1647	XM_006506373	MGP_CASTEiJ_P0077744	301 (aa)	XP_006506436	O88569
MGP_CASTEiJ_T0077745	-	1703	-	MGP_CASTEiJ_P0077745	353 (aa)	-	-
MGP_CASTEiJ_T0077746	-	1542	-	MGP_CASTEiJ_P0077746	301 (aa)	-	-
MGP_CASTEiJ_T0077747	-	1662	-	MGP_CASTEiJ_P0077747	341 (aa)	-	-
MGP_CASTEiJ_T0077753	-	466	-	MGP_CASTEiJ_P0077753	154 (aa)	-	-
MGP_CASTEiJ_T0077752	-	765	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077751	-	1637	-	MGP_CASTEiJ_P0077751	341 (aa)	-	-
MGP_CASTEiJ_T0077750	-	1517	-	MGP_CASTEiJ_P0077750	301 (aa)	-	-
MGP_CASTEiJ_T0077748	-	1553	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077749	-	1727	-	MGP_CASTEiJ_P0077749	353 (aa)	-	-
MGP_CASTEiJ_T0077754	-	831	-	MGP_CASTEiJ_P0077754	222 (aa)	-	-
MGP_CASTEiJ_T0077755	-	708	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077756	-	598	-	-	- (aa)	-	-
MGP_CASTEiJ_T0077757	-	3651	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0029831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0029831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029831	Hnrnpa2b1	55	40.769	MGP_CASTEiJ_G0025052	-	67	61.616
MGP_CASTEiJ_G0029831	Hnrnpa2b1	69	31.776	MGP_CASTEiJ_G0015387	Boll	64	36.000
MGP_CASTEiJ_G0029831	Hnrnpa2b1	69	40.940	MGP_CASTEiJ_G0028892	Hnrnpdl	56	40.940
MGP_CASTEiJ_G0029831	Hnrnpa2b1	87	36.744	MGP_CASTEiJ_G0028890	Hnrnpd	83	41.053
MGP_CASTEiJ_G0029831	Hnrnpa2b1	66	40.984	MGP_CASTEiJ_G0034713	Rbmx	90	40.299
MGP_CASTEiJ_G0029831	Hnrnpa2b1	72	57.233	MGP_CASTEiJ_G0019890	Hnrnpa0	91	49.458
MGP_CASTEiJ_G0029831	Hnrnpa2b1	72	31.250	MGP_CASTEiJ_G0028244	Tardbp	94	30.282
MGP_CASTEiJ_G0029831	Hnrnpa2b1	73	39.216	MGP_CASTEiJ_G0017584	Hnrnpab	64	38.462
MGP_CASTEiJ_G0029831	Hnrnpa2b1	91	41.379	MGP_CASTEiJ_G0029073	Msi1	61	43.750
MGP_CASTEiJ_G0029831	Hnrnpa2b1	55	45.833	MGP_CASTEiJ_G0034524	Rbm3	67	44.000
MGP_CASTEiJ_G0029831	Hnrnpa2b1	64	48.193	MGP_CASTEiJ_G0018234	Msi2	100	44.348
MGP_CASTEiJ_G0029831	Hnrnpa2b1	75	35.000	MGP_CASTEiJ_G0016822	-	99	40.244
MGP_CASTEiJ_G0029831	Hnrnpa2b1	64	35.616	MGP_CASTEiJ_G0016890	Celf5	86	33.333
MGP_CASTEiJ_G0029831	Hnrnpa2b1	82	74.286	MGP_CASTEiJ_G0021694	Hnrnpa1	53	63.717
MGP_CASTEiJ_G0029831	Hnrnpa2b1	75	44.737	MGP_CASTEiJ_G0016816	Cirbp	94	43.548
MGP_CASTEiJ_G0029831	Hnrnpa2b1	65	38.983	MGP_CASTEiJ_G0033906	Celf6	79	31.250