EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0029919 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 72384 bases
Position: chr6:64367193-64439576
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0078075	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0078077	-	600	-	MGP_CASTEiJ_P0078077	73 (aa)	-	-
MGP_CASTEiJ_T0078076	-	466	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078075	-	5169	-	MGP_CASTEiJ_P0078075	1021 (aa)	-	-
MGP_CASTEiJ_T0078074	-	602	XM_006505509	MGP_CASTEiJ_P0078074	134 (aa)	XP_006505572	Q04692
MGP_CASTEiJ_T0078088	-	2529	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078086	-	3031	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078087	-	648	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078084	-	640	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078085	-	726	-	MGP_CASTEiJ_P0078085	45 (aa)	-	-
MGP_CASTEiJ_T0078082	-	4177	-	MGP_CASTEiJ_P0078082	123 (aa)	-	-
MGP_CASTEiJ_T0078083	-	655	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078079	-	472	-	MGP_CASTEiJ_P0078079	68 (aa)	-	-
MGP_CASTEiJ_T0078078	-	734	-	MGP_CASTEiJ_P0078078	73 (aa)	-	-
MGP_CASTEiJ_T0078080	-	739	-	MGP_CASTEiJ_P0078080	73 (aa)	-	-
MGP_CASTEiJ_T0078081	-	2821	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0029919	Smarcad1	51	37.705	MGP_CASTEiJ_G0024296	Hells	66	37.887