EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0030089 (Gene tree)
Gene ID: -
Gene Symbol: Cnbp
Alias: AA408710|Cnbp1|Znf9
Full Name: cellular nucleic acid binding protein
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 9231 bases
Position: chr6:88329459-88338689
Accession: 88431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0078903	zf-CCHC	PF00098.23	1.7e-22	1	3
MGP_CASTEiJ_P0078903	zf-CCHC	PF00098.23	1.7e-22	2	3
MGP_CASTEiJ_P0078903	zf-CCHC	PF00098.23	1.7e-22	3	3
MGP_CASTEiJ_P0078904	zf-CCHC	PF00098.23	1.8e-22	1	3
MGP_CASTEiJ_P0078904	zf-CCHC	PF00098.23	1.8e-22	2	3
MGP_CASTEiJ_P0078904	zf-CCHC	PF00098.23	1.8e-22	3	3
MGP_CASTEiJ_P0078901	zf-CCHC	PF00098.23	2.1e-22	1	3
MGP_CASTEiJ_P0078901	zf-CCHC	PF00098.23	2.1e-22	2	3
MGP_CASTEiJ_P0078901	zf-CCHC	PF00098.23	2.1e-22	3	3
MGP_CASTEiJ_P0078905	zf-CCHC	PF00098.23	2.1e-22	1	3
MGP_CASTEiJ_P0078905	zf-CCHC	PF00098.23	2.1e-22	2	3
MGP_CASTEiJ_P0078905	zf-CCHC	PF00098.23	2.1e-22	3	3
MGP_CASTEiJ_P0078902	zf-CCHC	PF00098.23	2.6e-22	1	3
MGP_CASTEiJ_P0078902	zf-CCHC	PF00098.23	2.6e-22	2	3
MGP_CASTEiJ_P0078902	zf-CCHC	PF00098.23	2.6e-22	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0078907	-	922	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078906	-	926	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078905	-	963	-	MGP_CASTEiJ_P0078905	180 (aa)	-	-
MGP_CASTEiJ_T0078904	-	1625	-	MGP_CASTEiJ_P0078904	174 (aa)	-	-
MGP_CASTEiJ_T0078903	-	1672	-	MGP_CASTEiJ_P0078903	173 (aa)	-	-
MGP_CASTEiJ_T0078902	-	2189	-	MGP_CASTEiJ_P0078902	181 (aa)	-	-
MGP_CASTEiJ_T0078901	-	2186	XM_006505479	MGP_CASTEiJ_P0078901	180 (aa)	XP_006505542	P53996
MGP_CASTEiJ_T0078909	-	680	-	-	- (aa)	-	-
MGP_CASTEiJ_T0078908	-	996	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0030089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0030089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0030089	Cnbp	56	68.041	MGP_CASTEiJ_G0034949	Zcchc13	96	68.041