EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0030093 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 47853 bases
Position: chr6:88482335-88530187
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0078929	MMR_HSR1	PF01926.23	7.3e-07	1	1
MGP_CASTEiJ_P0078930	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_CASTEiJ_P0078931	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0078930	-	550	-	MGP_CASTEiJ_P0078930	98 (aa)	-	-
MGP_CASTEiJ_T0078931	-	372	-	MGP_CASTEiJ_P0078931	79 (aa)	-	-
MGP_CASTEiJ_T0078929	-	1033	-	MGP_CASTEiJ_P0078929	207 (aa)	-	P51150

Gene Model

Click here to download MGP_CASTEiJ_G0030093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0030093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0030093	Rab7	91	43.836	MGP_CASTEiJ_G0034658	Rab33a	85	36.111
MGP_CASTEiJ_G0030093	Rab7	90	48.864	MGP_CASTEiJ_G0023338	Rab18	92	36.082
MGP_CASTEiJ_G0030093	Rab7	91	44.944	MGP_CASTEiJ_G0026561	Rab25	75	39.157
MGP_CASTEiJ_G0030093	Rab7	100	44.304	MGP_CASTEiJ_G0019160	Rab15	81	33.520
MGP_CASTEiJ_G0030093	Rab7	91	48.611	MGP_CASTEiJ_G0029079	Rab35	95	34.872
MGP_CASTEiJ_G0030093	Rab7	91	45.833	MGP_CASTEiJ_G0024846	Rab14	83	40.310
MGP_CASTEiJ_G0030093	Rab7	90	50.704	MGP_CASTEiJ_G0023193	Rab12	64	36.316
MGP_CASTEiJ_G0030093	Rab7	90	50.704	MGP_CASTEiJ_G0023184	Rab31	82	44.512
MGP_CASTEiJ_G0030093	Rab7	95	62.667	MGP_CASTEiJ_G0035224	Rab9	88	54.237
MGP_CASTEiJ_G0030093	Rab7	91	45.833	MGP_CASTEiJ_G0022763	Rab11b	72	40.491
MGP_CASTEiJ_G0030093	Rab7	100	39.241	MGP_CASTEiJ_G0017380	Rab1a	78	39.264
MGP_CASTEiJ_G0030093	Rab7	90	50.704	MGP_CASTEiJ_G0034188	Rab6b	94	36.683
MGP_CASTEiJ_G0030093	Rab7	95	53.947	MGP_CASTEiJ_G0018675	Rab37	76	41.071
MGP_CASTEiJ_G0030093	Rab7	100	39.241	MGP_CASTEiJ_G0023899	Rab1b	97	34.848
MGP_CASTEiJ_G0030093	Rab7	91	45.833	MGP_CASTEiJ_G0016681	Rab36	63	36.571
MGP_CASTEiJ_G0030093	Rab7	79	31.169	MGP_CASTEiJ_G0034164	Mras	80	33.333
MGP_CASTEiJ_G0030093	Rab7	91	45.833	MGP_CASTEiJ_G0033947	Rab11a	87	38.686
MGP_CASTEiJ_G0030093	Rab7	91	45.833	MGP_CASTEiJ_G0031541	Rab30	88	38.043
MGP_CASTEiJ_G0030093	Rab7	100	40.000	MGP_CASTEiJ_G0026366	Rab33b	79	36.559
MGP_CASTEiJ_G0030093	Rab7	73	33.113	MGP_CASTEiJ_G0026847	Nras	95	33.108
MGP_CASTEiJ_G0030093	Rab7	91	46.067	MGP_CASTEiJ_G0020554	Rab2b	91	36.139
MGP_CASTEiJ_G0030093	Rab7	90	49.296	MGP_CASTEiJ_G0017200	Rab5b	78	42.442
MGP_CASTEiJ_G0030093	Rab7	99	47.436	MGP_CASTEiJ_G0023094	Rab5a	81	40.782
MGP_CASTEiJ_G0030093	Rab7	91	40.449	MGP_CASTEiJ_G0021498	Rabl2	71	33.735
MGP_CASTEiJ_G0030093	Rab7	91	31.461	MGP_CASTEiJ_G0018355	Arl5c	64	31.461
MGP_CASTEiJ_G0030093	Rab7	91	44.944	MGP_CASTEiJ_G0027193	Rab2a	84	36.269
MGP_CASTEiJ_G0030093	Rab7	95	37.333	MGP_CASTEiJ_G0018866	Dnajc27	60	36.145
MGP_CASTEiJ_G0030093	Rab7	94	43.478	MGP_CASTEiJ_G0015254	Rab23	70	33.918
MGP_CASTEiJ_G0030093	Rab7	90	40.278	MGP_CASTEiJ_G0034827	Rab39b	76	34.545
MGP_CASTEiJ_G0030093	Rab7	66	32.117	MGP_CASTEiJ_G0032241	Hras	96	30.808
MGP_CASTEiJ_G0030093	Rab7	97	63.636	MGP_CASTEiJ_G0035073	Rab9b	99	53.202
MGP_CASTEiJ_G0030093	Rab7	90	49.296	MGP_CASTEiJ_G0026136	Rab22a	82	40.854
MGP_CASTEiJ_G0030093	Rab7	90	49.296	MGP_CASTEiJ_G0018472	Rab5c	77	42.442
MGP_CASTEiJ_G0030093	Rab7	76	33.121	MGP_CASTEiJ_G0030551	Kras	87	33.929