EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0030316 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
25139 bases
Position
chr6:124477085-124502223
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0080139APOBEC_NPF08210.119.3e-3011
MGP_CASTEiJ_P0080140APOBEC_NPF08210.119.3e-3011
MGP_CASTEiJ_P0080141APOBEC_NPF08210.119.3e-3011
MGP_CASTEiJ_P0080142APOBEC_NPF08210.114.3e-1711
MGP_CASTEiJ_P0080143APOBEC_NPF08210.113.2e-1311
MGP_CASTEiJ_P0080139APOBEC_CPF05240.141.9e-2211
MGP_CASTEiJ_P0080140APOBEC_CPF05240.141.9e-2211
MGP_CASTEiJ_P0080141APOBEC_CPF05240.141.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0080144-372-MGP_CASTEiJ_P008014443 (aa)--
MGP_CASTEiJ_T0080145-361-MGP_CASTEiJ_P008014525 (aa)--
MGP_CASTEiJ_T0080146-561--- (aa)--
MGP_CASTEiJ_T0080147-520--- (aa)--
MGP_CASTEiJ_T0080140-2087-MGP_CASTEiJ_P0080140229 (aa)--
MGP_CASTEiJ_T0080141-2143-MGP_CASTEiJ_P0080141229 (aa)--
MGP_CASTEiJ_T0080142-667-MGP_CASTEiJ_P0080142121 (aa)--
MGP_CASTEiJ_T0080143-775-MGP_CASTEiJ_P0080143113 (aa)--
MGP_CASTEiJ_T0080139-2282XM_006505401MGP_CASTEiJ_P0080139229 (aa)XP_006505464P51908
Gene Model
Click here to download MGP_CASTEiJ_G0030316's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0030316's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0030316Apobec17434.737MGP_CASTEiJ_G0021348Apobec38438.028
MGP_CASTEiJ_G0030316Apobec15639.706MGP_CASTEiJ_G0030315Aicda5441.509

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