EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0030644 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 3753 bases
Position: chr7:1981797-1985549
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	1	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	2	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	3	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	4	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	5	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	6	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	7	8
MGP_CASTEiJ_P0081638	zf-C2H2	PF00096.26	2.7e-46	8	8
MGP_CASTEiJ_P0081638	zf-met	PF12874.7	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0081638	-	2271	-	MGP_CASTEiJ_P0081638	756 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0030644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0030644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0030644	-	73	30.796	MGP_CASTEiJ_G0022489	Zscan10	74	41.818
MGP_CASTEiJ_G0030644	-	99	100.000	MGP_CASTEiJ_G0030643	Zfp865	99	100.000
MGP_CASTEiJ_G0030644	-	66	42.593	MGP_CASTEiJ_G0030640	Zfp579	75	41.379
MGP_CASTEiJ_G0030644	-	66	31.675	MGP_CASTEiJ_G0021271	Zfp251	63	37.278
MGP_CASTEiJ_G0030644	-	66	44.643	MGP_CASTEiJ_G0023809	Zfp236	50	44.444
MGP_CASTEiJ_G0030644	-	67	34.911	MGP_CASTEiJ_G0026068	Zfp334	66	40.000
MGP_CASTEiJ_G0030644	-	71	30.072	MGP_CASTEiJ_G0033000	Zfp319	87	38.835
MGP_CASTEiJ_G0030644	-	66	31.343	MGP_CASTEiJ_G0031027	Zfp420	95	30.691