EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0030795 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 36429 bases
Position: chr7:13674616-13711044
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0082048	KH_1	PF00013.29	4.6e-47	1	3
MGP_CASTEiJ_P0082048	KH_1	PF00013.29	4.6e-47	2	3
MGP_CASTEiJ_P0082048	KH_1	PF00013.29	4.6e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0082048	-	1479	-	MGP_CASTEiJ_P0082048	492 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0030795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0030795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0030795	-	51	41.558	MGP_CASTEiJ_G0030066	Pcbp1	66	41.558
MGP_CASTEiJ_G0030795	-	100	100.000	MGP_CASTEiJ_G0030794	-	89	100.000
MGP_CASTEiJ_G0030795	-	54	37.681	MGP_CASTEiJ_G0019896	Hnrnpk	57	37.681
MGP_CASTEiJ_G0030795	-	50	41.096	MGP_CASTEiJ_G0021674	Pcbp2	68	41.096
MGP_CASTEiJ_G0030795	-	54	36.765	MGP_CASTEiJ_G0027142	Fubp1	61	36.765
MGP_CASTEiJ_G0030795	-	54	41.538	MGP_CASTEiJ_G0034226	Pcbp4	76	41.538
MGP_CASTEiJ_G0030795	-	100	67.816	MGP_CASTEiJ_G0019013	Nova1	64	73.333