EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0031027 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 15433 bases
Position: chr7:22453491-22468923
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	1	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	2	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	3	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	4	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	5	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	6	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	7	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	8	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	9	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	10	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	11	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	12	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	13	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	14	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	15	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	16	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	17	18
MGP_CASTEiJ_P0082947	zf-C2H2	PF00096.26	2.7e-113	18	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	1	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	2	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	3	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	4	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	5	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	6	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	7	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	8	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	9	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	10	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	11	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	12	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	13	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	14	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	15	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	16	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	17	18
MGP_CASTEiJ_P0082950	zf-C2H2	PF00096.26	2.7e-113	18	18
MGP_CASTEiJ_P0082947	zf-met	PF12874.7	8.5e-08	1	1
MGP_CASTEiJ_P0082950	zf-met	PF12874.7	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0082951	-	759	-	-	- (aa)	-	-
MGP_CASTEiJ_T0082947	-	2537	XM_006539873	MGP_CASTEiJ_P0082947	578 (aa)	XP_006539936	Q7TMN8
MGP_CASTEiJ_T0082950	-	2743	-	MGP_CASTEiJ_P0082950	578 (aa)	-	-
MGP_CASTEiJ_T0082948	-	689	-	-	- (aa)	-	-
MGP_CASTEiJ_T0082949	-	2974	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0031027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0031027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0031027	Zfp420	95	47.967	MGP_CASTEiJ_G0032061	-	67	47.967
MGP_CASTEiJ_G0031027	Zfp420	95	47.967	MGP_CASTEiJ_G0032062	-	67	47.967
MGP_CASTEiJ_G0031027	Zfp420	95	47.967	MGP_CASTEiJ_G0032063	-	67	47.967
MGP_CASTEiJ_G0031027	Zfp420	95	41.722	MGP_CASTEiJ_G0029924	Prdm5	91	48.387
MGP_CASTEiJ_G0031027	Zfp420	99	47.059	MGP_CASTEiJ_G0023809	Zfp236	91	42.991
MGP_CASTEiJ_G0031027	Zfp420	98	59.532	MGP_CASTEiJ_G0017568	Zfp454	87	58.310
MGP_CASTEiJ_G0031027	Zfp420	99	36.677	MGP_CASTEiJ_G0030898	Zfp574	93	37.533
MGP_CASTEiJ_G0031027	Zfp420	95	59.426	MGP_CASTEiJ_G0025643	Zfp661	72	59.426
MGP_CASTEiJ_G0031027	Zfp420	99	56.627	MGP_CASTEiJ_G0019986	-	94	56.627
MGP_CASTEiJ_G0031027	Zfp420	98	54.391	MGP_CASTEiJ_G0019982	Zfp748	94	54.255
MGP_CASTEiJ_G0031027	Zfp420	98	39.286	MGP_CASTEiJ_G0026106	Zfp64	69	36.504
MGP_CASTEiJ_G0031027	Zfp420	98	56.471	MGP_CASTEiJ_G0033485	Zfp872	87	56.471
MGP_CASTEiJ_G0031027	Zfp420	95	30.691	MGP_CASTEiJ_G0030644	-	66	31.343
MGP_CASTEiJ_G0031027	Zfp420	99	37.634	MGP_CASTEiJ_G0030643	Zfp865	80	37.634
MGP_CASTEiJ_G0031027	Zfp420	98	37.309	MGP_CASTEiJ_G0033000	Zfp319	93	36.919
MGP_CASTEiJ_G0031027	Zfp420	98	66.406	MGP_CASTEiJ_G0019990	Zfp493	62	66.406
MGP_CASTEiJ_G0031027	Zfp420	98	49.524	MGP_CASTEiJ_G0017666	Zfp672	89	49.524
MGP_CASTEiJ_G0031027	Zfp420	100	46.309	MGP_CASTEiJ_G0032778	Zfp709	84	53.305
MGP_CASTEiJ_G0031027	Zfp420	99	55.773	MGP_CASTEiJ_G0033422	Zfp26	80	55.773
MGP_CASTEiJ_G0031027	Zfp420	99	56.356	MGP_CASTEiJ_G0030868	Zfp61	59	56.356
MGP_CASTEiJ_G0031027	Zfp420	99	57.095	MGP_CASTEiJ_G0030869	Zfp94	84	57.095
MGP_CASTEiJ_G0031027	Zfp420	99	53.398	MGP_CASTEiJ_G0030861	Zfp112	67	53.398
MGP_CASTEiJ_G0031027	Zfp420	98	56.209	MGP_CASTEiJ_G0030866	Zfp108	80	56.209
MGP_CASTEiJ_G0031027	Zfp420	99	49.544	MGP_CASTEiJ_G0030867	Zfp93	85	49.544
MGP_CASTEiJ_G0031027	Zfp420	99	60.984	MGP_CASTEiJ_G0021271	Zfp251	74	60.984
MGP_CASTEiJ_G0031027	Zfp420	97	44.706	MGP_CASTEiJ_G0028178	Zbtb17	69	44.706
MGP_CASTEiJ_G0031027	Zfp420	98	48.031	MGP_CASTEiJ_G0028956	Gfi1	100	48.507
MGP_CASTEiJ_G0031027	Zfp420	98	48.744	MGP_CASTEiJ_G0028615	Zbtb49	89	50.000
MGP_CASTEiJ_G0031027	Zfp420	99	50.615	MGP_CASTEiJ_G0030966	Zfp59	82	50.746
MGP_CASTEiJ_G0031027	Zfp420	99	56.115	MGP_CASTEiJ_G0032059	Zfp768	51	56.071
MGP_CASTEiJ_G0031027	Zfp420	98	46.711	MGP_CASTEiJ_G0029798	Repin1	93	46.711
MGP_CASTEiJ_G0031027	Zfp420	99	52.489	MGP_CASTEiJ_G0026068	Zfp334	75	51.487
MGP_CASTEiJ_G0031027	Zfp420	99	50.450	MGP_CASTEiJ_G0022483	Zfp945	98	51.032
MGP_CASTEiJ_G0031027	Zfp420	97	41.080	MGP_CASTEiJ_G0022489	Zscan10	78	40.179
MGP_CASTEiJ_G0031027	Zfp420	98	38.136	MGP_CASTEiJ_G0030635	Zfp628	60	38.748
MGP_CASTEiJ_G0031027	Zfp420	99	51.052	MGP_CASTEiJ_G0031153	Zfp715	71	51.316
MGP_CASTEiJ_G0031027	Zfp420	98	56.275	MGP_CASTEiJ_G0019962	Rslcan18	71	56.275
MGP_CASTEiJ_G0031027	Zfp420	99	50.185	MGP_CASTEiJ_G0019963	Zfp759	90	50.185
MGP_CASTEiJ_G0031027	Zfp420	99	52.423	MGP_CASTEiJ_G0019561	Zkscan4	54	53.712
MGP_CASTEiJ_G0031027	Zfp420	97	56.897	MGP_CASTEiJ_G0030265	Zfp637	75	54.167
MGP_CASTEiJ_G0031027	Zfp420	98	54.648	MGP_CASTEiJ_G0022465	Zfp677	89	54.648
MGP_CASTEiJ_G0031027	Zfp420	98	55.027	MGP_CASTEiJ_G0022467	Zfp51	88	55.027
MGP_CASTEiJ_G0031027	Zfp420	98	51.882	MGP_CASTEiJ_G0017709	-	82	51.882
MGP_CASTEiJ_G0031027	Zfp420	99	57.346	MGP_CASTEiJ_G0033155	Zfp1	78	57.346
MGP_CASTEiJ_G0031027	Zfp420	98	50.000	MGP_CASTEiJ_G0032779	Zfp882	85	50.000