EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0031116 (Gene tree)
Gene ID
-
Gene Symbol
Lsm14a
Alias
2700023B17Rik|AA407828|AU017544|Fam61a|Rap55a|Tral
Full Name
LSM14A mRNA processing body assembly factor
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
51454 bases
Position
chr7:25566281-25617734
Accession
1914320
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0083360FDFPF09532.104.5e-3111
MGP_CASTEiJ_P0083361FDFPF09532.104e-1311
MGP_CASTEiJ_P0083365FDFPF09532.102.5e-1211
MGP_CASTEiJ_P0083365SM-ATXPF14438.67.3e-0811
MGP_CASTEiJ_P0083360SM-ATXPF14438.61.7e-0711
MGP_CASTEiJ_P0083365LSM14PF12701.71.2e-3311
MGP_CASTEiJ_P0083360LSM14PF12701.73.5e-3311
MGP_CASTEiJ_P0083366LSM14PF12701.72.1e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0083365-864-MGP_CASTEiJ_P0083365287 (aa)--
MGP_CASTEiJ_T0083364-889--- (aa)--
MGP_CASTEiJ_T0083367-2571--- (aa)--
MGP_CASTEiJ_T0083366-821-MGP_CASTEiJ_P0083366175 (aa)--
MGP_CASTEiJ_T0083361-1652-MGP_CASTEiJ_P0083361123 (aa)--
MGP_CASTEiJ_T0083360-2950XM_006540299MGP_CASTEiJ_P0083360462 (aa)XP_006540362Q8K2F8
MGP_CASTEiJ_T0083363-647-MGP_CASTEiJ_P0083363157 (aa)--
MGP_CASTEiJ_T0083362-1598-MGP_CASTEiJ_P008336272 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0031116's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0031116's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0031116Lsm14a9455.088MGP_CASTEiJ_G0026157Lsm14b9649.231

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us