EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0031476 (Gene tree)
Gene ID: -
Gene Symbol: Efl1
Alias: 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1
Full Name: elongation factor like GPTase 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 130011 bases
Position: chr7:76156936-76286946
Accession: 2141969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0084939	GTP_EFTU	PF00009.27	4.1e-61	1	1
MGP_CASTEiJ_P0084941	GTP_EFTU	PF00009.27	4.1e-61	1	1
MGP_CASTEiJ_P0084938	GTP_EFTU	PF00009.27	5.8e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0084942	-	543	-	-	- (aa)	-	-
MGP_CASTEiJ_T0084940	-	2455	-	-	- (aa)	-	-
MGP_CASTEiJ_T0084941	-	3610	-	MGP_CASTEiJ_P0084941	1127 (aa)	-	-
MGP_CASTEiJ_T0084937	-	2096	XM_006507160	MGP_CASTEiJ_P0084937	592 (aa)	XP_006507223	Q8C0D5
MGP_CASTEiJ_T0084939	-	3608	-	MGP_CASTEiJ_P0084939	1127 (aa)	-	-
MGP_CASTEiJ_T0084938	-	755	-	MGP_CASTEiJ_P0084938	234 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0031476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0031476	Efl1	73	39.306	MGP_CASTEiJ_G0018551	Eftud2	73	33.803
MGP_CASTEiJ_G0031476	Efl1	94	36.180	MGP_CASTEiJ_G0016869	Eef2	98	36.180
MGP_CASTEiJ_G0031476	Efl1	65	35.948	MGP_CASTEiJ_G0020120	Gfm2	62	36.943