EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0031541 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 92381 bases
Position: chr7:87000809-87093189
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0085105	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_CASTEiJ_P0085106	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0085107	-	1303	-	MGP_CASTEiJ_P0085107	175 (aa)	-	-
MGP_CASTEiJ_T0085106	-	1405	-	MGP_CASTEiJ_P0085106	203 (aa)	-	-
MGP_CASTEiJ_T0085105	-	2038	XM_006508293	MGP_CASTEiJ_P0085105	203 (aa)	XP_006508356	Q923S9

Gene Model

Click here to download MGP_CASTEiJ_G0031541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0031541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0031541	Rab30	79	41.615	MGP_CASTEiJ_G0034188	Rab6b	77	41.615
MGP_CASTEiJ_G0031541	Rab30	79	39.157	MGP_CASTEiJ_G0035073	Rab9b	82	39.157
MGP_CASTEiJ_G0031541	Rab30	97	41.546	MGP_CASTEiJ_G0026561	Rab25	96	41.546
MGP_CASTEiJ_G0031541	Rab30	83	42.857	MGP_CASTEiJ_G0017200	Rab5b	78	42.857
MGP_CASTEiJ_G0031541	Rab30	87	37.500	MGP_CASTEiJ_G0015254	Rab23	74	37.500
MGP_CASTEiJ_G0031541	Rab30	78	38.272	MGP_CASTEiJ_G0016681	Rab36	61	38.272
MGP_CASTEiJ_G0031541	Rab30	83	42.012	MGP_CASTEiJ_G0018472	Rab5c	78	42.012
MGP_CASTEiJ_G0031541	Rab30	97	37.981	MGP_CASTEiJ_G0033947	Rab11a	91	44.604
MGP_CASTEiJ_G0031541	Rab30	77	35.625	MGP_CASTEiJ_G0018075	Rab34	62	35.625
MGP_CASTEiJ_G0031541	Rab30	82	31.737	MGP_CASTEiJ_G0028465	Rheb	88	31.737
MGP_CASTEiJ_G0031541	Rab30	79	34.756	MGP_CASTEiJ_G0021498	Rabl2	70	34.756
MGP_CASTEiJ_G0031541	Rab30	97	39.524	MGP_CASTEiJ_G0022763	Rab11b	96	39.524
MGP_CASTEiJ_G0031541	Rab30	78	48.447	MGP_CASTEiJ_G0034827	Rab39b	76	48.447
MGP_CASTEiJ_G0031541	Rab30	81	33.735	MGP_CASTEiJ_G0034164	Mras	79	33.735
MGP_CASTEiJ_G0031541	Rab30	89	40.556	MGP_CASTEiJ_G0024846	Rab14	91	43.478
MGP_CASTEiJ_G0031541	Rab30	82	50.602	MGP_CASTEiJ_G0017380	Rab1a	81	50.602
MGP_CASTEiJ_G0031541	Rab30	82	50.000	MGP_CASTEiJ_G0023899	Rab1b	83	50.000
MGP_CASTEiJ_G0031541	Rab30	81	47.059	MGP_CASTEiJ_G0026366	Rab33b	74	47.059
MGP_CASTEiJ_G0031541	Rab30	87	33.146	MGP_CASTEiJ_G0030551	Kras	93	33.146
MGP_CASTEiJ_G0031541	Rab30	90	42.391	MGP_CASTEiJ_G0027193	Rab2a	87	42.391
MGP_CASTEiJ_G0031541	Rab30	80	42.331	MGP_CASTEiJ_G0026136	Rab22a	84	42.331
MGP_CASTEiJ_G0031541	Rab30	86	43.678	MGP_CASTEiJ_G0023094	Rab5a	81	43.678
MGP_CASTEiJ_G0031541	Rab30	84	34.503	MGP_CASTEiJ_G0026847	Nras	96	34.932
MGP_CASTEiJ_G0031541	Rab30	76	42.857	MGP_CASTEiJ_G0023184	Rab31	79	42.857
MGP_CASTEiJ_G0031541	Rab30	95	38.889	MGP_CASTEiJ_G0035224	Rab9	97	38.889
MGP_CASTEiJ_G0031541	Rab30	83	47.929	MGP_CASTEiJ_G0023338	Rab18	82	47.929
MGP_CASTEiJ_G0031541	Rab30	80	48.466	MGP_CASTEiJ_G0018675	Rab37	75	48.466
MGP_CASTEiJ_G0031541	Rab30	84	45.614	MGP_CASTEiJ_G0020554	Rab2b	81	48.718
MGP_CASTEiJ_G0031541	Rab30	81	51.176	MGP_CASTEiJ_G0034658	Rab33a	72	51.176
MGP_CASTEiJ_G0031541	Rab30	88	38.043	MGP_CASTEiJ_G0030093	Rab7	91	45.833
MGP_CASTEiJ_G0031541	Rab30	88	47.778	MGP_CASTEiJ_G0023193	Rab12	62	47.778
MGP_CASTEiJ_G0031541	Rab30	86	50.286	MGP_CASTEiJ_G0029079	Rab35	86	50.286
MGP_CASTEiJ_G0031541	Rab30	89	34.426	MGP_CASTEiJ_G0032241	Hras	94	34.426
MGP_CASTEiJ_G0031541	Rab30	86	42.529	MGP_CASTEiJ_G0019160	Rab15	82	42.529