EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0031985 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 78070 bases
Position: chr7:118822300-118900369
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0086452	Ago_hook	PF10427.9	2e-18	1	1
MGP_CASTEiJ_P0086455	Ago_hook	PF10427.9	3.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0086458	-	606	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086459	-	463	-	MGP_CASTEiJ_P0086459	154 (aa)	-	-
MGP_CASTEiJ_T0086454	-	1783	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086455	-	5221	-	MGP_CASTEiJ_P0086455	1397 (aa)	-	-
MGP_CASTEiJ_T0086456	-	4300	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086457	-	939	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086450	-	646	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086451	-	310	-	MGP_CASTEiJ_P0086451	53 (aa)	-	-
MGP_CASTEiJ_T0086452	-	8139	-	MGP_CASTEiJ_P0086452	1882 (aa)	-	-
MGP_CASTEiJ_T0086453	-	3583	-	MGP_CASTEiJ_P0086453	35 (aa)	-	-
MGP_CASTEiJ_T0086460	-	3297	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0031985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0031985	Tnrc6a	99	40.494	MGP_CASTEiJ_G0021362	Tnrc6b	98	37.589
MGP_CASTEiJ_G0031985	Tnrc6a	98	44.347	MGP_CASTEiJ_G0018751	Tnrc6c	99	40.765