EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032053 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 19315 bases
Position: chr7:123027851-123047165
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0086864	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_CASTEiJ_P0086863	MMR_HSR1	PF01926.23	3.6e-08	1	1
MGP_CASTEiJ_P0086861	MMR_HSR1	PF01926.23	5.3e-08	1	1
MGP_CASTEiJ_P0086859	MMR_HSR1	PF01926.23	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0086860	-	571	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086861	-	1048	-	MGP_CASTEiJ_P0086861	328 (aa)	-	-
MGP_CASTEiJ_T0086859	-	1413	XM_006508029	MGP_CASTEiJ_P0086859	366 (aa)	XP_006508092	P42209
MGP_CASTEiJ_T0086863	-	706	-	MGP_CASTEiJ_P0086863	186 (aa)	-	-
MGP_CASTEiJ_T0086862	-	789	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086865	-	821	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086864	-	599	-	MGP_CASTEiJ_P0086864	145 (aa)	-	-
MGP_CASTEiJ_T0086867	-	713	-	-	- (aa)	-	-
MGP_CASTEiJ_T0086866	-	242	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0032053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032053	Sept1	100	64.828	MGP_CASTEiJ_G0015692	Sept2	100	60.748
MGP_CASTEiJ_G0032053	Sept1	100	66.897	MGP_CASTEiJ_G0018215	Sept4	99	64.516
MGP_CASTEiJ_G0032053	Sept1	100	59.310	MGP_CASTEiJ_G0033500	Sept7	76	49.709
MGP_CASTEiJ_G0032053	Sept1	100	47.260	MGP_CASTEiJ_G0021739	Sept12	77	43.775
MGP_CASTEiJ_G0032053	Sept1	100	50.000	MGP_CASTEiJ_G0018749	Sept9	83	46.000
MGP_CASTEiJ_G0032053	Sept1	100	40.136	MGP_CASTEiJ_G0034606	Sept6	76	41.349
MGP_CASTEiJ_G0032053	Sept1	100	38.095	MGP_CASTEiJ_G0017614	Sept8	76	36.765
MGP_CASTEiJ_G0032053	Sept1	100	40.816	MGP_CASTEiJ_G0028867	Sept11	76	40.762
MGP_CASTEiJ_G0032053	Sept1	100	43.537	MGP_CASTEiJ_G0016585	Sept10	71	40.064
MGP_CASTEiJ_G0032053	Sept1	100	50.685	MGP_CASTEiJ_G0021397	Sept3	86	46.575
MGP_CASTEiJ_G0032053	Sept1	100	68.276	MGP_CASTEiJ_G0021876	Sept5	93	63.068