EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 8959 bases
Position: chr7:123225084-123234042
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	1	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	2	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	3	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	4	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	5	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	6	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	7	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	8	9
MGP_CASTEiJ_P0086887	zf-C2H2	PF00096.26	2.4e-48	9	9
MGP_CASTEiJ_P0086887	zf-met	PF12874.7	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0086887	-	2955	-	MGP_CASTEiJ_P0086887	461 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0032063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032063	-	87	46.032	MGP_CASTEiJ_G0019982	Zfp748	99	46.032
MGP_CASTEiJ_G0032063	-	66	42.081	MGP_CASTEiJ_G0029798	Repin1	92	40.404
MGP_CASTEiJ_G0032063	-	87	44.000	MGP_CASTEiJ_G0026068	Zfp334	99	44.000
MGP_CASTEiJ_G0032063	-	53	45.000	MGP_CASTEiJ_G0028615	Zbtb49	64	46.575
MGP_CASTEiJ_G0032063	-	61	44.444	MGP_CASTEiJ_G0019986	-	97	46.341
MGP_CASTEiJ_G0032063	-	86	35.872	MGP_CASTEiJ_G0033155	Zfp1	98	35.872
MGP_CASTEiJ_G0032063	-	58	47.788	MGP_CASTEiJ_G0030265	Zfp637	71	45.522
MGP_CASTEiJ_G0032063	-	90	42.478	MGP_CASTEiJ_G0017709	-	95	42.478
MGP_CASTEiJ_G0032063	-	61	36.765	MGP_CASTEiJ_G0033000	Zfp319	87	39.535
MGP_CASTEiJ_G0032063	-	92	46.715	MGP_CASTEiJ_G0022467	Zfp51	95	45.339
MGP_CASTEiJ_G0032063	-	92	42.125	MGP_CASTEiJ_G0022465	Zfp677	99	42.125
MGP_CASTEiJ_G0032063	-	100	100.000	MGP_CASTEiJ_G0032062	-	100	100.000
MGP_CASTEiJ_G0032063	-	100	100.000	MGP_CASTEiJ_G0032061	-	100	100.000
MGP_CASTEiJ_G0032063	-	59	34.722	MGP_CASTEiJ_G0029479	Gtf3a	85	30.347
MGP_CASTEiJ_G0032063	-	60	48.421	MGP_CASTEiJ_G0030635	Zfp628	62	46.835
MGP_CASTEiJ_G0032063	-	67	47.967	MGP_CASTEiJ_G0031027	Zfp420	95	47.967
MGP_CASTEiJ_G0032063	-	87	50.000	MGP_CASTEiJ_G0033422	Zfp26	89	50.000
MGP_CASTEiJ_G0032063	-	79	45.070	MGP_CASTEiJ_G0031153	Zfp715	73	45.070
MGP_CASTEiJ_G0032063	-	86	42.268	MGP_CASTEiJ_G0033485	Zfp872	99	42.268
MGP_CASTEiJ_G0032063	-	62	42.177	MGP_CASTEiJ_G0023809	Zfp236	68	43.590
MGP_CASTEiJ_G0032063	-	60	42.562	MGP_CASTEiJ_G0017666	Zfp672	90	42.105
MGP_CASTEiJ_G0032063	-	62	42.308	MGP_CASTEiJ_G0028178	Zbtb17	55	41.129
MGP_CASTEiJ_G0032063	-	62	43.651	MGP_CASTEiJ_G0022489	Zscan10	78	43.651
MGP_CASTEiJ_G0032063	-	80	42.982	MGP_CASTEiJ_G0030966	Zfp59	99	42.982
MGP_CASTEiJ_G0032063	-	89	44.964	MGP_CASTEiJ_G0030869	Zfp94	99	44.964
MGP_CASTEiJ_G0032063	-	70	52.830	MGP_CASTEiJ_G0030868	Zfp61	62	52.830
MGP_CASTEiJ_G0032063	-	62	46.565	MGP_CASTEiJ_G0030867	Zfp93	74	46.565
MGP_CASTEiJ_G0032063	-	61	35.714	MGP_CASTEiJ_G0030643	Zfp865	72	35.714
MGP_CASTEiJ_G0032063	-	85	48.404	MGP_CASTEiJ_G0025643	Zfp661	94	44.651
MGP_CASTEiJ_G0032063	-	71	37.452	MGP_CASTEiJ_G0029924	Prdm5	74	37.452
MGP_CASTEiJ_G0032063	-	58	41.704	MGP_CASTEiJ_G0019561	Zkscan4	53	41.704
MGP_CASTEiJ_G0032063	-	91	42.969	MGP_CASTEiJ_G0022483	Zfp945	98	42.969
MGP_CASTEiJ_G0032063	-	87	42.510	MGP_CASTEiJ_G0019963	Zfp759	99	42.510
MGP_CASTEiJ_G0032063	-	92	43.310	MGP_CASTEiJ_G0019962	Rslcan18	82	43.310
MGP_CASTEiJ_G0032063	-	85	50.000	MGP_CASTEiJ_G0021271	Zfp251	94	50.000
MGP_CASTEiJ_G0032063	-	71	47.809	MGP_CASTEiJ_G0030861	Zfp112	63	47.809
MGP_CASTEiJ_G0032063	-	91	45.528	MGP_CASTEiJ_G0030866	Zfp108	99	45.528
MGP_CASTEiJ_G0032063	-	89	45.385	MGP_CASTEiJ_G0017568	Zfp454	99	43.774
MGP_CASTEiJ_G0032063	-	64	38.816	MGP_CASTEiJ_G0026106	Zfp64	69	32.389
MGP_CASTEiJ_G0032063	-	59	44.086	MGP_CASTEiJ_G0030898	Zfp574	71	38.961
MGP_CASTEiJ_G0032063	-	91	43.798	MGP_CASTEiJ_G0032779	Zfp882	99	43.798
MGP_CASTEiJ_G0032063	-	90	46.575	MGP_CASTEiJ_G0032778	Zfp709	99	46.575
MGP_CASTEiJ_G0032063	-	66	42.775	MGP_CASTEiJ_G0028956	Gfi1	99	44.275
MGP_CASTEiJ_G0032063	-	90	52.174	MGP_CASTEiJ_G0019990	Zfp493	74	52.174