EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032483 (Gene tree)
Gene ID: -
Gene Symbol: Zmat4
Alias: 9630048M01Rik
Full Name: zinc finger%2C matrin type 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 524947 bases
Position: chr8:21150144-21675090
Accession: 2443497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0088527	zf-met	PF12874.7	2.9e-27	1	4
MGP_CASTEiJ_P0088527	zf-met	PF12874.7	2.9e-27	2	4
MGP_CASTEiJ_P0088527	zf-met	PF12874.7	2.9e-27	3	4
MGP_CASTEiJ_P0088527	zf-met	PF12874.7	2.9e-27	4	4
MGP_CASTEiJ_P0088526	zf-met	PF12874.7	9.1e-13	1	2
MGP_CASTEiJ_P0088526	zf-met	PF12874.7	9.1e-13	2	2
MGP_CASTEiJ_P0088529	zf-met	PF12874.7	3.2e-06	1	1
MGP_CASTEiJ_P0088527	zf-C2H2_jaz	PF12171.8	4.9e-23	1	2
MGP_CASTEiJ_P0088527	zf-C2H2_jaz	PF12171.8	4.9e-23	2	2
MGP_CASTEiJ_P0088526	zf-C2H2_jaz	PF12171.8	2.6e-09	1	1
MGP_CASTEiJ_P0088529	zf-C2H2_jaz	PF12171.8	9.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0088528	-	2282	-	MGP_CASTEiJ_P0088528	225 (aa)	-	-
MGP_CASTEiJ_T0088529	-	454	-	MGP_CASTEiJ_P0088529	68 (aa)	-	-
MGP_CASTEiJ_T0088526	-	361	XM_006509139	MGP_CASTEiJ_P0088526	96 (aa)	XP_006509202	Q8BZ94
MGP_CASTEiJ_T0088527	-	4181	-	MGP_CASTEiJ_P0088527	229 (aa)	-	-
MGP_CASTEiJ_T0088530	-	348	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032483	Zmat4	94	50.549	MGP_CASTEiJ_G0019848	Zfp346	75	44.022
MGP_CASTEiJ_G0032483	Zmat4	84	35.172	MGP_CASTEiJ_G0026303	Zmat3	74	35.172