EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032544 (Gene tree)
Gene ID: -
Gene Symbol: Rbpms
Alias: 2010300K22Rik|2700019M19Rik|AU017537|Hermes|RBP-MS|hermes
Full Name: RNA binding protein gene with multiple splicing
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 155861 bases
Position: chr8:31747899-31903759
Accession: 1334446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0088708	RRM_1	PF00076.22	2e-11	1	1
MGP_CASTEiJ_P0088706	RRM_1	PF00076.22	2.1e-11	1	1
MGP_CASTEiJ_P0088707	RRM_1	PF00076.22	2.1e-11	1	1
MGP_CASTEiJ_P0088716	RRM_1	PF00076.22	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0088706	-	2359	-	MGP_CASTEiJ_P0088706	197 (aa)	-	Q9WVB0
MGP_CASTEiJ_T0088707	-	2462	-	MGP_CASTEiJ_P0088707	197 (aa)	-	-
MGP_CASTEiJ_T0088713	-	643	-	-	- (aa)	-	-
MGP_CASTEiJ_T0088712	-	405	-	MGP_CASTEiJ_P0088712	57 (aa)	-	-
MGP_CASTEiJ_T0088715	-	189	-	MGP_CASTEiJ_P0088715	62 (aa)	-	-
MGP_CASTEiJ_T0088714	-	525	-	-	- (aa)	-	-
MGP_CASTEiJ_T0088717	-	459	-	MGP_CASTEiJ_P0088717	64 (aa)	-	-
MGP_CASTEiJ_T0088710	-	869	-	MGP_CASTEiJ_P0088710	93 (aa)	-	-
MGP_CASTEiJ_T0088718	-	317	-	-	- (aa)	-	-
MGP_CASTEiJ_T0088716	-	991	-	MGP_CASTEiJ_P0088716	220 (aa)	-	-
MGP_CASTEiJ_T0088708	-	2325	-	MGP_CASTEiJ_P0088708	191 (aa)	-	-
MGP_CASTEiJ_T0088711	-	549	-	MGP_CASTEiJ_P0088711	70 (aa)	-	-
MGP_CASTEiJ_T0088709	-	1325	-	MGP_CASTEiJ_P0088709	197 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0032544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032544	Rbpms	90	71.658	MGP_CASTEiJ_G0033968	Rbpms2	90	69.519