EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032713 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 9591 bases
Position: chr8:69741607-69751197
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0089312	ResIII	PF04851.15	4.3e-06	1	1
MGP_CASTEiJ_P0089312	DEAD	PF00270.29	7.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0089312	-	2137	-	MGP_CASTEiJ_P0089312	480 (aa)	-	Q4FZF3
MGP_CASTEiJ_T0089313	-	2163	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089316	-	1446	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089317	-	303	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089314	-	599	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089315	-	1099	-	MGP_CASTEiJ_P0089315	354 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0032713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032713	Ddx49	95	32.743	MGP_CASTEiJ_G0033719	Ddx6	75	33.333
MGP_CASTEiJ_G0032713	Ddx49	92	32.402	MGP_CASTEiJ_G0033086	Ddx28	68	31.649
MGP_CASTEiJ_G0032713	Ddx49	96	33.333	MGP_CASTEiJ_G0019865	Ddx41	62	32.921
MGP_CASTEiJ_G0032713	Ddx49	59	33.175	MGP_CASTEiJ_G0017334	Ddx56	94	32.627
MGP_CASTEiJ_G0032713	Ddx49	93	34.897	MGP_CASTEiJ_G0034068	Ddx43	60	34.913
MGP_CASTEiJ_G0032713	Ddx49	97	33.046	MGP_CASTEiJ_G0022856	Ddx39b	99	36.667
MGP_CASTEiJ_G0032713	Ddx49	98	32.741	MGP_CASTEiJ_G0024730	Ddx31	63	31.136
MGP_CASTEiJ_G0032713	Ddx49	94	32.239	MGP_CASTEiJ_G0021938	Eif4a2	92	32.546
MGP_CASTEiJ_G0032713	Ddx49	97	38.286	MGP_CASTEiJ_G0026082	Ddx27	59	33.696
MGP_CASTEiJ_G0032713	Ddx49	93	30.175	MGP_CASTEiJ_G0028995	Ddx51	71	30.573
MGP_CASTEiJ_G0032713	Ddx49	92	33.238	MGP_CASTEiJ_G0029202	Ddx55	58	33.056
MGP_CASTEiJ_G0032713	Ddx49	92	38.066	MGP_CASTEiJ_G0015762	Ddx18	56	36.148
MGP_CASTEiJ_G0032713	Ddx49	97	49.271	MGP_CASTEiJ_G0030485	Ddx47	95	45.824
MGP_CASTEiJ_G0032713	Ddx49	76	30.081	MGP_CASTEiJ_G0018172	Ddx52	61	30.081
MGP_CASTEiJ_G0032713	Ddx49	95	33.138	MGP_CASTEiJ_G0015890	Ddx59	58	32.609
MGP_CASTEiJ_G0032713	Ddx49	95	30.769	MGP_CASTEiJ_G0018781	Eif4a3	90	31.135
MGP_CASTEiJ_G0032713	Ddx49	87	34.062	MGP_CASTEiJ_G0018617	-	76	34.062
MGP_CASTEiJ_G0032713	Ddx49	97	33.333	MGP_CASTEiJ_G0032855	Ddx39	87	33.156
MGP_CASTEiJ_G0032713	Ddx49	90	37.500	MGP_CASTEiJ_G0016265	D1Pas1	55	36.316
MGP_CASTEiJ_G0032713	Ddx49	95	34.454	MGP_CASTEiJ_G0020197	Ddx4	52	34.474
MGP_CASTEiJ_G0032713	Ddx49	96	40.909	MGP_CASTEiJ_G0018908	Ddx1	63	40.909
MGP_CASTEiJ_G0032713	Ddx49	91	39.521	MGP_CASTEiJ_G0021336	Ddx17	56	37.903
MGP_CASTEiJ_G0032713	Ddx49	90	36.919	MGP_CASTEiJ_G0034550	Ddx3x	55	35.789