EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032732 (Gene tree)
Gene ID: -
Gene Symbol: Lsm4
Alias: -
Full Name: LSM4 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 5488 bases
Position: chr8:70146906-70152393
Accession: 1354692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0089377	LSM	PF01423.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0089378	-	163	-	MGP_CASTEiJ_P0089378	46 (aa)	-	-
MGP_CASTEiJ_T0089379	-	375	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089377	-	911	XM_006509706	MGP_CASTEiJ_P0089377	138 (aa)	XP_006509769	D3YTP8

Gene Model

Click here to download MGP_CASTEiJ_G0032732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032732	Lsm4	70	35.644	MGP_CASTEiJ_G0022828	Lsm2	92	34.831
MGP_CASTEiJ_G0032732	Lsm4	65	31.522	MGP_CASTEiJ_G0016688	Snrpd3	56	34.722