EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032889 (Gene tree)
Gene ID: -
Gene Symbol: Calr
Alias: CRT|Calregulin
Full Name: calreticulin
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 5087 bases
Position: chr8:84872287-84877373
Accession: 88252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0089862	Calreticulin	PF00262.18	7.8e-81	1	2
MGP_CASTEiJ_P0089862	Calreticulin	PF00262.18	7.8e-81	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0089864	-	855	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089865	-	722	-	-	- (aa)	-	-
MGP_CASTEiJ_T0089862	-	2183	-	MGP_CASTEiJ_P0089862	416 (aa)	-	P14211
MGP_CASTEiJ_T0089863	-	943	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0032889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032889	Calr	90	51.475	MGP_CASTEiJ_G0032795	Calr3	85	53.392
MGP_CASTEiJ_G0032889	Calr	89	62.234	MGP_CASTEiJ_G0027700	Calr4	87	62.295
MGP_CASTEiJ_G0032889	Calr	79	36.598	MGP_CASTEiJ_G0032847	Clgn	63	36.598