EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0032941 (Gene tree)
Gene ID: -
Gene Symbol: Sall1
Alias: Msal-3
Full Name: sal-like 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 17283 bases
Position: chr8:89204166-89221448
Accession: 1889585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	1	6
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	2	6
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	3	6
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	4	6
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	5	6
MGP_CASTEiJ_P0090047	zf-C2H2	PF00096.26	8.2e-34	6	6
MGP_CASTEiJ_P0090047	zf-met	PF12874.7	1.7e-24	1	5
MGP_CASTEiJ_P0090047	zf-met	PF12874.7	1.7e-24	2	5
MGP_CASTEiJ_P0090047	zf-met	PF12874.7	1.7e-24	3	5
MGP_CASTEiJ_P0090047	zf-met	PF12874.7	1.7e-24	4	5
MGP_CASTEiJ_P0090047	zf-met	PF12874.7	1.7e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0090047	-	5561	XM_006531238	MGP_CASTEiJ_P0090047	1323 (aa)	XP_006531301	Q6P5E3

Gene Model

Click here to download MGP_CASTEiJ_G0032941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0032941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032941	Sall1	67	53.704	MGP_CASTEiJ_G0023809	Zfp236	90	50.000
MGP_CASTEiJ_G0032941	Sall1	99	65.306	MGP_CASTEiJ_G0023806	Sall3	99	65.306
MGP_CASTEiJ_G0032941	Sall1	99	64.706	MGP_CASTEiJ_G0026105	Sall4	100	64.706