EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0032944 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|Kiaa0308|PRIC320|Pric320|mKIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 236541 bases
Position: chr8:91099942-91336482
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0090052	ResIII	PF04851.15	3.1e-06	1	1
MGP_CASTEiJ_P0090053	ResIII	PF04851.15	3.2e-06	1	1
MGP_CASTEiJ_P0090053	BRK	PF07533.16	3.1e-30	1	2
MGP_CASTEiJ_P0090053	BRK	PF07533.16	3.1e-30	2	2
MGP_CASTEiJ_P0090052	BRK	PF07533.16	3.1e-30	1	2
MGP_CASTEiJ_P0090052	BRK	PF07533.16	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0090053	-	11514	-	MGP_CASTEiJ_P0090053	2868 (aa)	-	-
MGP_CASTEiJ_T0090052	-	11562	XM_006530568	MGP_CASTEiJ_P0090052	2884 (aa)	XP_006530631	Q8BYH8

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0032944	Chd9	72	62.298	MGP_CASTEiJ_G0025989	Chd6	87	68.882
MGP_CASTEiJ_G0032944	Chd9	82	71.016	MGP_CASTEiJ_G0027194	Chd7	94	54.201