EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0033155 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 32527 bases
Position: chr8:113354904-113387430
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	1	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	2	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	3	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	4	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	5	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	6	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	7	8
MGP_CASTEiJ_P0090666	zf-C2H2	PF00096.26	1.3e-51	8	8
MGP_CASTEiJ_P0090666	zf-met	PF12874.7	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0090666	-	1875	XM_011248348	MGP_CASTEiJ_P0090666	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_CASTEiJ_G0033155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0033155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033155	Zfp1	98	47.353	MGP_CASTEiJ_G0021271	Zfp251	94	47.353
MGP_CASTEiJ_G0033155	Zfp1	80	52.252	MGP_CASTEiJ_G0032059	Zfp768	51	52.018
MGP_CASTEiJ_G0033155	Zfp1	99	48.548	MGP_CASTEiJ_G0019962	Rslcan18	86	48.548
MGP_CASTEiJ_G0033155	Zfp1	98	38.078	MGP_CASTEiJ_G0019963	Zfp759	99	40.391
MGP_CASTEiJ_G0033155	Zfp1	98	51.440	MGP_CASTEiJ_G0031153	Zfp715	95	51.440
MGP_CASTEiJ_G0033155	Zfp1	67	39.791	MGP_CASTEiJ_G0030643	Zfp865	80	39.286
MGP_CASTEiJ_G0033155	Zfp1	98	58.400	MGP_CASTEiJ_G0019990	Zfp493	74	58.400
MGP_CASTEiJ_G0033155	Zfp1	60	43.478	MGP_CASTEiJ_G0028956	Gfi1	100	46.457
MGP_CASTEiJ_G0033155	Zfp1	68	40.167	MGP_CASTEiJ_G0029924	Prdm5	67	50.847
MGP_CASTEiJ_G0033155	Zfp1	99	40.144	MGP_CASTEiJ_G0017709	-	95	39.600
MGP_CASTEiJ_G0033155	Zfp1	60	46.429	MGP_CASTEiJ_G0030635	Zfp628	60	46.073
MGP_CASTEiJ_G0033155	Zfp1	63	39.362	MGP_CASTEiJ_G0029798	Repin1	92	39.362
MGP_CASTEiJ_G0033155	Zfp1	75	40.183	MGP_CASTEiJ_G0033000	Zfp319	90	40.183
MGP_CASTEiJ_G0033155	Zfp1	83	51.502	MGP_CASTEiJ_G0030868	Zfp61	64	51.502
MGP_CASTEiJ_G0033155	Zfp1	98	50.185	MGP_CASTEiJ_G0030869	Zfp94	96	50.185
MGP_CASTEiJ_G0033155	Zfp1	91	55.319	MGP_CASTEiJ_G0030866	Zfp108	99	52.675
MGP_CASTEiJ_G0033155	Zfp1	67	51.452	MGP_CASTEiJ_G0030867	Zfp93	70	54.500
MGP_CASTEiJ_G0033155	Zfp1	80	57.534	MGP_CASTEiJ_G0030861	Zfp112	57	57.534
MGP_CASTEiJ_G0033155	Zfp1	99	43.913	MGP_CASTEiJ_G0033485	Zfp872	99	43.023
MGP_CASTEiJ_G0033155	Zfp1	79	40.526	MGP_CASTEiJ_G0030898	Zfp574	71	39.604
MGP_CASTEiJ_G0033155	Zfp1	67	42.083	MGP_CASTEiJ_G0028178	Zbtb17	54	46.512
MGP_CASTEiJ_G0033155	Zfp1	78	57.346	MGP_CASTEiJ_G0031027	Zfp420	99	57.346
MGP_CASTEiJ_G0033155	Zfp1	63	49.485	MGP_CASTEiJ_G0028615	Zbtb49	76	48.611
MGP_CASTEiJ_G0033155	Zfp1	99	45.455	MGP_CASTEiJ_G0022465	Zfp677	99	52.675
MGP_CASTEiJ_G0033155	Zfp1	99	47.465	MGP_CASTEiJ_G0022467	Zfp51	94	47.465
MGP_CASTEiJ_G0033155	Zfp1	67	46.559	MGP_CASTEiJ_G0017666	Zfp672	90	46.559
MGP_CASTEiJ_G0033155	Zfp1	68	47.887	MGP_CASTEiJ_G0030966	Zfp59	80	47.887
MGP_CASTEiJ_G0033155	Zfp1	99	51.029	MGP_CASTEiJ_G0033422	Zfp26	89	51.029
MGP_CASTEiJ_G0033155	Zfp1	98	41.429	MGP_CASTEiJ_G0025643	Zfp661	96	41.429
MGP_CASTEiJ_G0033155	Zfp1	98	35.872	MGP_CASTEiJ_G0032061	-	86	35.872
MGP_CASTEiJ_G0033155	Zfp1	98	35.872	MGP_CASTEiJ_G0032062	-	86	35.872
MGP_CASTEiJ_G0033155	Zfp1	98	35.872	MGP_CASTEiJ_G0032063	-	86	35.872
MGP_CASTEiJ_G0033155	Zfp1	67	48.193	MGP_CASTEiJ_G0023809	Zfp236	60	48.193
MGP_CASTEiJ_G0033155	Zfp1	67	55.090	MGP_CASTEiJ_G0019561	Zkscan4	53	55.090
MGP_CASTEiJ_G0033155	Zfp1	100	43.103	MGP_CASTEiJ_G0026068	Zfp334	99	54.502
MGP_CASTEiJ_G0033155	Zfp1	99	52.941	MGP_CASTEiJ_G0022483	Zfp945	99	52.941
MGP_CASTEiJ_G0033155	Zfp1	99	45.693	MGP_CASTEiJ_G0032778	Zfp709	99	45.693
MGP_CASTEiJ_G0033155	Zfp1	77	57.042	MGP_CASTEiJ_G0030265	Zfp637	91	57.042
MGP_CASTEiJ_G0033155	Zfp1	99	48.828	MGP_CASTEiJ_G0017568	Zfp454	98	48.828
MGP_CASTEiJ_G0033155	Zfp1	99	42.769	MGP_CASTEiJ_G0032779	Zfp882	99	45.349
MGP_CASTEiJ_G0033155	Zfp1	79	46.460	MGP_CASTEiJ_G0022489	Zscan10	83	46.053
MGP_CASTEiJ_G0033155	Zfp1	64	43.137	MGP_CASTEiJ_G0026106	Zfp64	70	43.137
MGP_CASTEiJ_G0033155	Zfp1	98	49.145	MGP_CASTEiJ_G0019982	Zfp748	99	49.145
MGP_CASTEiJ_G0033155	Zfp1	76	48.148	MGP_CASTEiJ_G0019986	-	94	49.772