EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0033463 (Gene tree)
Gene ID: -
Gene Symbol: Smarca4
Alias: Baf190a|Brg1|HP1-BP72|SNF2beta|SW1/SNF|Snf2b|Snf2l4|b2b508.1Clo|b2b692Clo
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 91476 bases
Position: chr9:19003147-19094622
Accession: 88192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0091615	ResIII	PF04851.15	2.2e-09	1	1
MGP_CASTEiJ_P0091614	ResIII	PF04851.15	3.1e-09	1	1
MGP_CASTEiJ_P0091612	ResIII	PF04851.15	3.1e-09	1	1
MGP_CASTEiJ_P0091613	ResIII	PF04851.15	3.1e-09	1	1
MGP_CASTEiJ_P0091615	BRK	PF07533.16	1.8e-17	1	1
MGP_CASTEiJ_P0091613	BRK	PF07533.16	2.5e-17	1	1
MGP_CASTEiJ_P0091614	BRK	PF07533.16	2.5e-17	1	1
MGP_CASTEiJ_P0091612	BRK	PF07533.16	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0091612	-	6343	XM_006510117	MGP_CASTEiJ_P0091612	1614 (aa)	XP_006510180	Q3TKT4
MGP_CASTEiJ_T0091613	-	6365	-	MGP_CASTEiJ_P0091613	1617 (aa)	-	-
MGP_CASTEiJ_T0091614	-	5405	-	MGP_CASTEiJ_P0091614	1613 (aa)	-	-
MGP_CASTEiJ_T0091615	-	3800	-	MGP_CASTEiJ_P0091615	1266 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033463	Smarca4	92	79.812	MGP_CASTEiJ_G0024207	Smarca2	92	75.597