EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0033485 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 28607 bases
Position: chr9:19614292-19642898
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	1	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	2	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	3	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	4	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	5	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	6	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	7	8
MGP_CASTEiJ_P0091657	zf-C2H2	PF00096.26	1.4e-42	8	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	1	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	2	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	3	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	4	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	5	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	6	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	7	8
MGP_CASTEiJ_P0091658	zf-C2H2	PF00096.26	6e-42	8	8
MGP_CASTEiJ_P0091657	zf-met	PF12874.7	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0091657	-	2705	-	MGP_CASTEiJ_P0091657	430 (aa)	-	F7APL9
MGP_CASTEiJ_T0091658	-	1311	-	MGP_CASTEiJ_P0091658	436 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0033485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0033485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0033485	Zfp872	99	42.268	MGP_CASTEiJ_G0032061	-	86	42.268
MGP_CASTEiJ_G0033485	Zfp872	100	52.770	MGP_CASTEiJ_G0032778	Zfp709	99	52.770
MGP_CASTEiJ_G0033485	Zfp872	100	50.281	MGP_CASTEiJ_G0032779	Zfp882	99	50.281
MGP_CASTEiJ_G0033485	Zfp872	99	51.976	MGP_CASTEiJ_G0017568	Zfp454	98	52.159
MGP_CASTEiJ_G0033485	Zfp872	87	56.471	MGP_CASTEiJ_G0031027	Zfp420	98	56.471
MGP_CASTEiJ_G0033485	Zfp872	96	41.493	MGP_CASTEiJ_G0030966	Zfp59	99	41.493
MGP_CASTEiJ_G0033485	Zfp872	82	33.702	MGP_CASTEiJ_G0033000	Zfp319	91	34.530
MGP_CASTEiJ_G0033485	Zfp872	100	51.852	MGP_CASTEiJ_G0017709	-	95	53.378
MGP_CASTEiJ_G0033485	Zfp872	99	48.560	MGP_CASTEiJ_G0025643	Zfp661	94	48.560
MGP_CASTEiJ_G0033485	Zfp872	99	49.091	MGP_CASTEiJ_G0019982	Zfp748	99	49.091
MGP_CASTEiJ_G0033485	Zfp872	85	51.623	MGP_CASTEiJ_G0019986	-	95	52.349
MGP_CASTEiJ_G0033485	Zfp872	83	36.207	MGP_CASTEiJ_G0030643	Zfp865	78	36.207
MGP_CASTEiJ_G0033485	Zfp872	78	55.814	MGP_CASTEiJ_G0030868	Zfp61	62	55.814
MGP_CASTEiJ_G0033485	Zfp872	100	45.304	MGP_CASTEiJ_G0030869	Zfp94	96	45.304
MGP_CASTEiJ_G0033485	Zfp872	84	52.901	MGP_CASTEiJ_G0030861	Zfp112	60	52.901
MGP_CASTEiJ_G0033485	Zfp872	95	51.163	MGP_CASTEiJ_G0030866	Zfp108	71	47.278
MGP_CASTEiJ_G0033485	Zfp872	100	46.176	MGP_CASTEiJ_G0019963	Zfp759	99	46.667
MGP_CASTEiJ_G0033485	Zfp872	83	46.715	MGP_CASTEiJ_G0032059	Zfp768	51	46.715
MGP_CASTEiJ_G0033485	Zfp872	80	47.753	MGP_CASTEiJ_G0030635	Zfp628	60	45.918
MGP_CASTEiJ_G0033485	Zfp872	99	63.889	MGP_CASTEiJ_G0019990	Zfp493	74	63.889
MGP_CASTEiJ_G0033485	Zfp872	79	43.396	MGP_CASTEiJ_G0028956	Gfi1	100	44.444
MGP_CASTEiJ_G0033485	Zfp872	95	48.780	MGP_CASTEiJ_G0031153	Zfp715	64	63.636
MGP_CASTEiJ_G0033485	Zfp872	100	48.641	MGP_CASTEiJ_G0033422	Zfp26	89	48.864
MGP_CASTEiJ_G0033485	Zfp872	99	44.476	MGP_CASTEiJ_G0022467	Zfp51	93	44.199
MGP_CASTEiJ_G0033485	Zfp872	99	44.715	MGP_CASTEiJ_G0022465	Zfp677	98	44.715
MGP_CASTEiJ_G0033485	Zfp872	97	35.933	MGP_CASTEiJ_G0029924	Prdm5	78	37.755
MGP_CASTEiJ_G0033485	Zfp872	99	42.268	MGP_CASTEiJ_G0032063	-	86	42.268
MGP_CASTEiJ_G0033485	Zfp872	78	35.882	MGP_CASTEiJ_G0030898	Zfp574	72	35.882
MGP_CASTEiJ_G0033485	Zfp872	78	46.316	MGP_CASTEiJ_G0023809	Zfp236	70	44.211
MGP_CASTEiJ_G0033485	Zfp872	86	41.667	MGP_CASTEiJ_G0028178	Zbtb17	52	43.144
MGP_CASTEiJ_G0033485	Zfp872	99	42.268	MGP_CASTEiJ_G0032062	-	86	42.268
MGP_CASTEiJ_G0033485	Zfp872	96	55.319	MGP_CASTEiJ_G0030265	Zfp637	88	55.319
MGP_CASTEiJ_G0033485	Zfp872	87	38.235	MGP_CASTEiJ_G0017666	Zfp672	100	39.474
MGP_CASTEiJ_G0033485	Zfp872	99	41.013	MGP_CASTEiJ_G0026068	Zfp334	99	41.013
MGP_CASTEiJ_G0033485	Zfp872	99	43.023	MGP_CASTEiJ_G0033155	Zfp1	99	43.913
MGP_CASTEiJ_G0033485	Zfp872	99	53.714	MGP_CASTEiJ_G0019962	Rslcan18	80	53.714
MGP_CASTEiJ_G0033485	Zfp872	80	33.159	MGP_CASTEiJ_G0029798	Repin1	94	33.159
MGP_CASTEiJ_G0033485	Zfp872	97	40.260	MGP_CASTEiJ_G0022489	Zscan10	99	40.260
MGP_CASTEiJ_G0033485	Zfp872	99	44.058	MGP_CASTEiJ_G0022483	Zfp945	98	44.073
MGP_CASTEiJ_G0033485	Zfp872	78	40.909	MGP_CASTEiJ_G0026106	Zfp64	71	35.563
MGP_CASTEiJ_G0033485	Zfp872	78	44.330	MGP_CASTEiJ_G0028615	Zbtb49	78	44.928
MGP_CASTEiJ_G0033485	Zfp872	99	52.669	MGP_CASTEiJ_G0021271	Zfp251	94	52.669
MGP_CASTEiJ_G0033485	Zfp872	82	56.863	MGP_CASTEiJ_G0019561	Zkscan4	53	56.863
MGP_CASTEiJ_G0033485	Zfp872	84	46.602	MGP_CASTEiJ_G0030867	Zfp93	76	46.865